Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01312 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAGAACCAGGGCTGCTGCGAAGAAAAAGGAGGAGGGTAGTATTGGAGGAAACGAGGATTTGAATGCGGCGGTGGATGAAGCAGTGCTTTCCAGTGTCACGAAACAGAAGGTGGCCGCAGCAAAGCAGTACATTGAAAATCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAAGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACAATGATAGGAAAAGGAGCATTTGGAGAGGTTAGAGTCTGTAGGGAGAAGACTAGTGGTCATGTGTATGCAATGAAGAAGCTAAAAAAATCAGAGATGCTCCGCAGAGGCCAGGTTGAGCATGTTAAATCTGAAAGGAATCTCCTCGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCATTCCAGGATGCTGAATATTTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTAATGAGAAAGGATACCTTGACCGAAGATGAAGCTAGATTTTATGTTGGAGAAACTGTTCTGGCTATTGAATCTATACATAAACACAATTATATACACAGGGATATCAAGCCAGACAATTTGTTACTTGAAAGATATGGGCACTTGAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAATACACTTGAAGAAAAGGATTTTTCTGTGGGTCAGAATGTGAATGGAACTTCACAAAATGAAGAGCGGACAACTCCTAAACGTTCACAACAAGAACAACTTCAACATTGGCAAATGAACCGGAGAACACTTGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCGATTATGTACGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCGATGTTGACTTGTAGGAAGATTGTAAATTGGAAAGCTTATTTGAAATTTCCTGAAGAAGCTAGGCTGTCCCCAGAAGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTAAATCAGAGGCTGGGGTCAAATGGTGCAGATGAAATAAAGGCTCATTCATTCTTCAAAGGTGTTGAATGGGATAAGCTGTATCATATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGATGAGTCTGACAGCCAAACTCAATCATCGTCGAGATCTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACTTAAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGATTATCAAGTTCCTGGGATGGCTGAACTGAAGAAGAAACAGTCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGAAACACCAGAGCAAGAGTTGTCTGATACATCTGCTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCCAATTAGAGTTATCTCGCAGAGACAAGAATCTTCCTCCCAGTAGGAATCATAACTCAGCATTTTAA 1677 0.4013 MDSARSWLQKFQPRDRTRAAAKKKEEGSIGGNEDLNAAVDEAVLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKSERNLLAEVDSNCIVKLYCSFQDAEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLERYGHLKLSDFGLCKPLDCNTLEEKDFSVGQNVNGTSQNEERTTPKRSQQEQLQHWQMNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMLTCRKIVNWKAYLKFPEEARLSPEAKDLISKLLCNVNQRLGSNGADEIKAHSFFKGVEWDKLYHMEAAFIPEVNDELDTQNFEKFDESDSQTQSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKQSKPKRPTIKSLFETPEQELSDTSAQGSFLKLLPPQLELSRRDKNLPPSRNHNSAF 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01312 558 FunFam Non-specific serine/threonine protein kinase 318 437 - -
Viun7g01312 558 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 471 - -
Viun7g01312 558 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun7g01312 558 MobiDBLite consensus disorder prediction 500 558 - -
Viun7g01312 558 MobiDBLite consensus disorder prediction 9 30 - -
Viun7g01312 558 FunFam Non-specific serine/threonine protein kinase 205 272 - -
Viun7g01312 558 MobiDBLite consensus disorder prediction 282 303 - -
Viun7g01312 558 Gene3D Phosphorylase Kinase; domain 1 119 448 - -
Viun7g01312 558 MobiDBLite consensus disorder prediction 516 532 - -
Viun7g01312 558 CDD STKc_NDR_like 119 483 - -
Viun7g01312 558 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Viun7g01312 558 Gene3D Transferase(Phosphotransferase) domain 1 205 437 - -
Viun7g01312 558 FunFam Non-specific serine/threonine protein kinase 92 204 - -
Viun7g01312 558 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Viun7g01312 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Viun7g01312 558 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Viun7g01312 558 Coils Coil 63 83 - -
Viun7g01312 558 Pfam Protein kinase domain 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01312 558 SMART serkin_6 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01312 558 MobiDBLite consensus disorder prediction 1 32 - -
Viun7g01312 558 ProSiteProfiles Protein kinase domain profile. 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01312 558 CDD MobB_NDR_LATS-like 55 116 - -
Viun7g01312 558 SUPERFAMILY Protein kinase-like (PK-like) 94 473 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01312 Viun-Chr7 15280271 15288856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01312 1 522 AGC Kinase Gene Family AT2G20470 78.137 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Viun7g01312 Pkinase 7.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01312 K08790 - gmx:100779528 1008.44