Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01311 ATGATGAAAGTGGGATTCGAGCTGGTTCATGCAAATTATAATCAAAACATGATTCGTCCACACATGCATGAAACATGGGATCACTACTCAAATGCCCCAACCCCAGCAACAGAAAACCAGTGCCTAAATTTGGGGCAGAATGAAGTCTCTGAGTGGATGGAGGAACACATTGGTGACATCACCAAACACCTTGTTGAAGAGCTAACAGAAACAACTTGTGATAGCTTGTTGAAGACTTCCCATGACAACTTTGTTCCCTCACTTTTACCCAACTTCATTCTGCCCCAAAGCAACAATGTGTGTGATCAAGGGTTGAGCCTCATAACCCTTCTAATGGAGTGTGCAGTGGCAATTTCAGTTGAGAACCTGGGTGAGGCTAATAGGATGTTACTAGAGCTAACACAAGTGGCCTCACCCTACAAAGCATCATGTGGTGAAAGAGTTGTTGCTTATTTTGCCAAGGCCATGAGTTGCAGGGTGATGAATTCATGGCTTGGGGTGTGTTCACCTTTGGCTGATCACAGAAACATTAACTGGGCATTCCAAGTGTTGAACAACGTTACCCCTTTCATAAAATTTGCACACTTCACTTCGAACCAGGCAATCCTTGAGGCAGTGAACCATTGTGACAGTATTCACATCATTGACTTGGACATCATGCAAGGGCTGCAATGGCCACCTTTTTTGCACATATTAGCGACCAGAATGGAGGGTCCAGCACAGGTGAGCATGACATGCTTGGGAAGCTCAATGGAAGTCCTGGTTGAAACTGGGAAACAACTCTCCAACTTTGCAAGAAGGCTTGGGATATCATTCAAGTTCTACCCCATTGCAAGCAAGTTTGGGGAAGTAATTGATGTGTCGATGCTGCATGTAAAGCCTGGCGAGGCAGTGGCAGTGCATTGGTTGCAGCATTCACTGTACGATGCAACTGGACCTGATTGGAAAACACTGAGACTCCTTGAGGAGTTGGAGCCAAGAATCATCACCTTGGTGGAGCAAGATGTGAACCATGGAGGCTCATTCTTGGACCGTTTTGTGGGTTCCTTGCACTACTACTCCACCCTATTTGATTCTCTTGGAGCATACTTGCACTTTGATGATGCTAACAGGCACCGAGTGGAGCATGACCTTCTCTCTAGGGAAATCAACAATGTGTTGGCCATAGGAGGCCCTAAGAGGAGTGGTGAAGACAAGTTTAGGCACTGGAGAAGAGAGCTTTCTACCCACTCTTTTCTTCAGCTTCCCATGAGTGCCAATTCAATGGCTCAAGCTCACTTGATATTGAACATGTTTTCACCAGCTTATGGCTATAGCCTTTCACAACTTGATGGCACATTACGGCTTGGATGGAAGGATACAAGTTTGTACACAGCTTCTGCATGGACCTCTTCTGCATCTAACTAG 1407 0.457 MMKVGFELVHANYNQNMIRPHMHETWDHYSNAPTPATENQCLNLGQNEVSEWMEEHIGDITKHLVEELTETTCDSLLKTSHDNFVPSLLPNFILPQSNNVCDQGLSLITLLMECAVAISVENLGEANRMLLELTQVASPYKASCGERVVAYFAKAMSCRVMNSWLGVCSPLADHRNINWAFQVLNNVTPFIKFAHFTSNQAILEAVNHCDSIHIIDLDIMQGLQWPPFLHILATRMEGPAQVSMTCLGSSMEVLVETGKQLSNFARRLGISFKFYPIASKFGEVIDVSMLHVKPGEAVAVHWLQHSLYDATGPDWKTLRLLEELEPRIITLVEQDVNHGGSFLDRFVGSLHYYSTLFDSLGAYLHFDDANRHRVEHDLLSREINNVLAIGGPKRSGEDKFRHWRRELSTHSFLQLPMSANSMAQAHLILNMFSPAYGYSLSQLDGTLRLGWKDTSLYTASAWTSSASN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01311 468 ProSiteProfiles GRAS family profile. 98 463 IPR005202 -
Viun7g01311 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 459 IPR005202 -
Viun7g01311 468 Pfam GRAS domain family 107 463 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01311 Viun-Chr7 15275426 15277226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01311 102 463 GRAS Transcription Factor Family AT3G54220 54.472 1.51e-131 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun7g01311 GRAS 1e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01311 - - gmx:100775656 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01311 7 15275426 15277226 Viun7g01311 7 15275426 15277226 ECH