Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01307 ATGGAGCATGTGATTGGTGGCAAGTTTAAATTGGGAAGGAAAATTGGGAGCGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAATTGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTTTGGAAGATTTGTTCAATTATTGTAACCGGAAGTTCTCGTTGAAGACAGTTTTAATGCTTGCTGATCAGTTGATTAACAGAGTTGAATATATGCATTCCAGAGGTTTCCTTCACCGTGACATCAAGCCCGACAATTTCTTAATGGGTCTAGGACGGAAAGCAAATCAAGTGTATGCCATTGATTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGTACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTACGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAGGGACTGAAGGCTGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGACAAAGGTGTCAACTCCCATAGAGGTGCTTTGCAAATCTTATCCCTCTGAATTTGTATCATACTTCCACTATTGCCGTTCATTGCGATTTGAGGACAAACCAGATTATTCATATTTAAAGAGACTTTTCCGAGACCTGTTTATTAGAGAAGGCTATCAGTTTGACTACATTTTCGACTGGACTATGTTAAAGTATCCACAGATCAGTAGTAGCTCAAGAGGACGGCATGGCACTGGCAAGGCAGCTGTGCAAGCAAGTCCACATGTACAAAAGCCAGAAAAAATATCAGTTGGGAAAGACATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCAGGAGGAATCCTGCAGGTTCAAGTCCTCATGTTGATCACGTCAAACAGAGGAGTTTTGAGGATGTACCGGTGCAAAAGGATACGCACTATGGCCAGCACAATACTGGTCGATATGGCAGCAGTTCTAGAAAAGCCATGATCACATCAAACAAGCCAGTTTCCTCAGGTGACCATACTGGCAGGCCAACCATGACTGGGAGCCGTCCATCTGGTGCTCATAGAATTCAACCGGCATACGACACCAAACAAGCAAATTATGCACGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGCCAGAGGCCACCGCGATGATCCTCTGAGAAGCTTTGAGCTCCTCAACATCAGGAAGTAA 1392 0.4497 MEHVIGGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGIEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISSSSRGRHGTGKAAVQASPHVQKPEKISVGKDIREKFSGAVEAFSRRNPAGSSPHVDHVKQRSFEDVPVQKDTHYGQHNTGRYGSSSRKAMITSNKPVSSGDHTGRPTMTGSRPSGAHRIQPAYDTKQANYARGGGGGGGGGGGGGARGHRDDPLRSFELLNIRK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01307 463 MobiDBLite consensus disorder prediction 447 463 - -
Viun7g01307 463 MobiDBLite consensus disorder prediction 301 321 - -
Viun7g01307 463 Gene3D Transferase(Phosphotransferase) domain 1 1 340 - -
Viun7g01307 463 CDD STKc_CK1_delta_epsilon 8 282 - -
Viun7g01307 463 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Viun7g01307 463 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Viun7g01307 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Viun7g01307 463 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01307 463 FunFam Putative Casein kinase I 1 85 - -
Viun7g01307 463 FunFam Casein kinase 1-like protein 1 330 - -
Viun7g01307 463 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01307 463 MobiDBLite consensus disorder prediction 370 463 - -
Viun7g01307 463 PANTHER CASEIN KINASE-RELATED 8 349 - -
Viun7g01307 463 MobiDBLite consensus disorder prediction 371 413 - -
Viun7g01307 463 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01307 Viun-Chr7 15040314 15048522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01307 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 4.47e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Viun7g01307 Pkinase 4.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01307 K08960 K08959 gmx:100789031 856.67