Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01303 ATGATTGGTTGTGGGGGACTGTTTGGGGTTCTTATGAAGAGTTCTGGAACTACTGAGTTGAATGCTTTCTACCCCATTAGACCAGAATGCCAAGCAGATGTTCCCGCCCCTCGTTTTAAACCAAGGGCTGGCAAAACTCTAAGTCAAAGAAGATGGCTAGCATCATTCTCTGCAGATGGTCACTTGGATATTGCAAAAGTCCTACGACGAATTCAGCGAGGGGGTGTCCATCCTTCAATCAAAGGGGAAGTGTGGGAGTTCTTGCTAGGTTGCTATGATCCTAATAGTTCACTTGAAGAACGGAATGAGCTCAAGCAACGCAGGAGGGGGCAGTATGATATGTGGAAAGCTGAATGTCAAAGGATGGTCCCAGTCATTGGTTCTGGAAAATTTATTACTACACCCCTCATTGATGACGATGGTCAGATAATAGATCCTTCTTTGGTAACTGTCCAGACTTTAGACAAGAAAGTTTTGCAGTGGTTGCAGTTATTACATCAGATCGGCCTGGATGTTGTTCGAACAGATCGGGCACTTGTCTTTTATGAGAGTGAAGATAATCAAGCAAAACTTTGGGATGTGCTATCAGTTTATGCTTGGTTGGACAATGATATTGGTTATGTACAAGGAATGAATGATATTTGCTCACCTATAATTATTCTTATTGAGAATGAAGCAGATTGCTACTGGTGCTTTGACCGTGCAATGCGAAGGATGAGAGAGAACTTCAGGTGCAGTGCAAGTTCAATGGGGGTCCAATCTCAGTTAGCTACACTCTCACAGATAATAAAAACAGTTGATCCTAAGCTTCATCATCACCTTGAGGATTTAGATGGAGGAGAGTATCTCTTTGCATTTCGCATGCTTATGGTTCTTTTCCGAAGAGAATTTTCTTTTGCAGATACTTTATACCTTTGGGAGTTGATGTGGGGCATGGAATACAACCCAAATATCTTCATAAATTATGAGGATCCAGATTCTAAAACAAAAGATCCCTCACCAGCAAACGACAAAGTTTTGAAGCAATATGGAAAATTTGAGAGAAAAAATGTGAAGACTGGCCATACAGAGGAACATAGTGCACTGGCTGTTTTTCTTGTTGCAAGCGTTCTTGAGATCAAGAATAGACGGATTTTGAACGAAGCCAAGGGTGTTGATGACGTTGTCAAGATCTTAGGTGACATCACCTCAAATCTTGATGCTAAAAAGGCATGCACTGAAGCACTGAAAATTCAGAAAAAATACCTGAGCAAGGCCAAGAAGTGA 1266 0.4155 MIGCGGLFGVLMKSSGTTELNAFYPIRPECQADVPAPRFKPRAGKTLSQRRWLASFSADGHLDIAKVLRRIQRGGVHPSIKGEVWEFLLGCYDPNSSLEERNELKQRRRGQYDMWKAECQRMVPVIGSGKFITTPLIDDDGQIIDPSLVTVQTLDKKVLQWLQLLHQIGLDVVRTDRALVFYESEDNQAKLWDVLSVYAWLDNDIGYVQGMNDICSPIIILIENEADCYWCFDRAMRRMRENFRCSASSMGVQSQLATLSQIIKTVDPKLHHHLEDLDGGEYLFAFRMLMVLFRREFSFADTLYLWELMWGMEYNPNIFINYEDPDSKTKDPSPANDKVLKQYGKFERKNVKTGHTEEHSALAVFLVASVLEIKNRRILNEAKGVDDVVKILGDITSNLDAKKACTEALKIQKKYLSKAKK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01303 421 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 149 243 - -
Viun7g01303 421 ProSiteProfiles TBC/rab GAP domain profile. 75 313 IPR000195 -
Viun7g01303 421 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 46 392 - -
Viun7g01303 421 SMART tbc_4 72 331 IPR000195 -
Viun7g01303 421 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 52 273 IPR035969 -
Viun7g01303 421 Pfam Rab-GTPase-TBC domain 156 310 IPR000195 -
Viun7g01303 421 FunFam TBC1 domain family member 15-like 146 243 - -
Viun7g01303 421 Gene3D - 249 421 - -
Viun7g01303 421 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 251 415 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01303 Viun-Chr7 15029429 15037795 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01303 - - gmx:100785775 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02130 1 32558996 32564808 Viun7g01303 7 15029429 15037795 PCT