Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01301 ATGGGTCCGAACCTAGAATGTCGTATGTACGAGGCGAGGTACCCGGAGGTGGACATGGCGGTGATGATACAGGTGAAGAACATCGCGGACATGGGCGCCTACGTGTCACTTCTGGAGTACAACAACATCGAGGGCATGATCTTGTTCTCGGAGCTCTCCCGCCGTCGGATTCGCAGCGTCAACAGCCTCATCAAGGTGGGGCGCATCGAGCCCGTCATGGTCCTCCGTGTCGACAAGGAAAAGGGTTACATCGATCTCAGCAAGCGTAGGGTCTCGGAAGAGGACATTCAGGCCTGCGAGGAGAGGTACAACAAGAGCAAGCTCGTCCACTCCATCATGCGCCACGTTGCCGAAACCCTCAACATCGATTTGGAGGAGCTCTATGTTCACATTGGATGGCCTTTATATCGCAAATATGGTCATGCTTTTGAGGCTTTCAAAATAATTGTCACTGATCCTGATTCTGTTTTGAATACGCTCACCCGTGAGATCGGGACAATGGAGACGCCTTTGCAACCAGGTTGGAAAACGCCCATGCTGGACCGATACGACATGTTTGTAATGTAG 567 0.522 MGPNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVNSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLNIDLEELYVHIGWPLYRKYGHAFEAFKIIVTDPDSVLNTLTREIGTMETPLQPGWKTPMLDRYDMFVM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01301 188 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Viun7g01301 188 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 172 IPR024054 -
Viun7g01301 188 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 161 IPR011488 GO:0003723|GO:0003743
Viun7g01301 188 FunFam Eukaryotic translation initiation factor 2 subunit alpha 4 91 - -
Viun7g01301 188 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 162 IPR011488 GO:0003723|GO:0003743
Viun7g01301 188 Gene3D - 3 91 IPR012340 -
Viun7g01301 188 SUPERFAMILY Nucleic acid-binding proteins 13 94 IPR012340 -
Viun7g01301 188 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Viun7g01301 188 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Viun7g01301 188 FunFam Eukaryotic translation initiation factor 2 subunit alpha 92 176 - -
Viun7g01301 188 SMART S1_6 16 89 IPR022967 -
Viun7g01301 188 SUPERFAMILY eIF2alpha middle domain-like 91 161 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01301 Viun-Chr7 15025104 15026439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01301 3 164 Eukaryotic Initiation Factors Gene Family AT2G40290 93.210 4.24e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01301 K03237 - gmx:100815696 317.775