Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01275 ATGGAAGCACATCCTACTTTCTCCATTGAAAGATCAAAGCAACTCAATAACATGGGGATGTCTGGAGCACTTTCTTCATCTTTGTCAATCCTTCCAATACCCACAGAAGATATGTATCCTAGGCTGCCTGAATCACAGTTGGATATTGTAGAACAAGAGCTTGTGACAAGACCTTATACTAATTCAAGTTATTTGAATTCAAATGGAGTAGTTGGGCATATTTTTTCGTCTTCTTCTGGATATTCAACTGACCTTCATCACTCATCTCTTTCACCTGATGAAAAGCACTCTACTAACGCTCGTTTTATTTCACAATCATCAACCAACATTGCCCAATTTCCATTATCATATTCTTCGAATACTGGACCACCAACTTCAGCAGCACCAAGCCATTTTTCCAAAGAAAACAGTGCTTCCTGGCATACAGAGTCCCTGCCCAGTTTTCTGGATTTTCCTGCACATCACTCAATGGACGATAACAGAGTAGAAAGTAGTGATTGCCCTATAATGGCATCCGAGGAGTATTGCAAGCAAAATGATTGGCAGGAGTGGGCTGAGCGGCTAATCAGTGATGATGACACTTTGACTTCTAATTGGGATGACCTTCTTACTGACAACATTCGAGACATTGAGCCAAAGGTGCCATTCCAGGTTGCAAAATCACTTTCACAGTTTCCAGGACATCAATCCCAAGGTCTACAACTTCCTGCTTCATATGGAGACAATTGCTCTGGAGCTACCCTCTCCTCCTCATCAAATTCTACTCCTGCCAAGTCACGAATGCGTTGGACACCAGAACTTCACGAGGCGTTTGTGGAGGCTGTCAACCAACTTGGGGGAAGTGAAAGAGCTACTCCAAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTGAAAAGCCATTTGCAGAAATACAGGACAGCTAGGTATAGACCGGAGTCATCTGAAGGAGTAACGGAGAAAAAAGCAGGTTCCATTGAAGATATGGCATCTCTAGATTTAAAAACTGGTATTGAGATCACTGAAGCTCTACGACTACAAATGGAGGTTCAGAAGCGGTTGCATGAACAGCTAGAGATTCAAAGAAATTTGCAGCTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAATCTGGAAGTGAAGCGTTGAAGGCATCATCATCTACCATTGAGACTCAATCTGGAGTATCTTTGAATGCCACGAGAGACTTCGCGGTCAAAAATGTTTTAGAAGCATCACAAGTAGAGCATTGTAGGTCAGAAGCTGATCATGCTAACCGCAGTACCACAGTTGAGGAAGGCTCGCTGGAAAAGGGTGGGAATGCTGATTCTCCCAAAACTCAACATGTTATTGCTAGTGATGACAGTGCAGAAGCCCCAAAACGTCAAAGAACAGAGTAA 1437 0.4273 MEAHPTFSIERSKQLNNMGMSGALSSSLSILPIPTEDMYPRLPESQLDIVEQELVTRPYTNSSYLNSNGVVGHIFSSSSGYSTDLHHSSLSPDEKHSTNARFISQSSTNIAQFPLSYSSNTGPPTSAAPSHFSKENSASWHTESLPSFLDFPAHHSMDDNRVESSDCPIMASEEYCKQNDWQEWAERLISDDDTLTSNWDDLLTDNIRDIEPKVPFQVAKSLSQFPGHQSQGLQLPASYGDNCSGATLSSSSNSTPAKSRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVTEKKAGSIEDMASLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGSEALKASSSTIETQSGVSLNATRDFAVKNVLEASQVEHCRSEADHANRSTTVEEGSLEKGGNADSPKTQHVIASDDSAEAPKRQRTE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01275 478 NCBIfam myb-like DNA-binding domain, SHAQKYF class 258 312 IPR006447 GO:0003677
Viun7g01275 478 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 255 315 IPR017930 -
Viun7g01275 478 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 234 468 IPR044848 GO:0003700
Viun7g01275 478 MobiDBLite consensus disorder prediction 429 443 - -
Viun7g01275 478 FunFam Myb family transcription factor 257 315 - -
Viun7g01275 478 Pfam MYB-CC type transfactor, LHEQLE motif 343 390 IPR025756 -
Viun7g01275 478 Pfam Myb-like DNA-binding domain 260 311 IPR001005 -
Viun7g01275 478 MobiDBLite consensus disorder prediction 114 135 - -
Viun7g01275 478 Gene3D - 257 316 - -
Viun7g01275 478 SUPERFAMILY Homeodomain-like 255 312 IPR009057 -
Viun7g01275 478 Coils Coil 346 366 - -
Viun7g01275 478 MobiDBLite consensus disorder prediction 429 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01275 Viun-Chr7 14802825 14815592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01275 32 387 G2-like Transcription Factor Family AT4G28610 50.000 1.36e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun7g01275 Myb_DNA-binding 8.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01275 - - gmx:100793593 761.911