Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun7g01266 | ATGTCGAAGAGAGGGCGCGGAGGATCGGCGGGTAACAAGTTCCGCATGTCACTGGGTCTGCCAGTGGCGGCGACGGTGAACTGCGCCGACAACACGGGAGCGAAGAACCTCTACATCATCTCGGTGAAAGGGATCAAAGGTCGTTTGAATCGTCTTCCTTCGGCATGCGTTGGCGACATGGTCATGGCCACCGTGAAGAAGGGGAAGCCCGATCTCAGGAAGAAGGTGTTGCCAGCTGTCATCGTTCGCCAGCGCAAGCCCTGGCGCCGAAAGGATGGCGTTTACATGTACTTTGAAGATAATGCCGGTGTTATTGTCAATCCCAAGGGAGAAATGAAAGGTTCTGCTATCACCGGTCCTATAGGAAAGGAGTGCGCTGATTTGTGGCCAAGGATTGCTAGTGCAGCCAATGCTATCGTTTGA | 423 | 0.5414 | MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV | 140 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun7g01266 | 140 | Gene3D | Ribosomal protein L14 | 1 | 140 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
Viun7g01266 | 140 | SUPERFAMILY | Ribosomal protein L14 | 11 | 140 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
Viun7g01266 | 140 | PANTHER | 50S/60S RIBOSOMAL PROTEIN L14/L23 | 20 | 139 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Viun7g01266 | 140 | SMART | Ribosomal_L14_2 | 19 | 140 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Viun7g01266 | 140 | Hamap | 50S ribosomal protein L14 [rplN]. | 19 | 140 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Viun7g01266 | 140 | ProSitePatterns | Ribosomal protein L14 signature. | 79 | 105 | IPR019972 | - | |
Viun7g01266 | 140 | FunFam | 60S ribosomal protein L23 | 1 | 140 | - | - | |
Viun7g01266 | 140 | Pfam | Ribosomal protein L14p/L23e | 22 | 140 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun7g01266 | Viun-Chr7 | 14455081 | 14456386 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun7g01266 | 1 | 140 | Cytoplasmic Ribosomal Protein Gene Family | AT1G04480 | 97.857 | 7.48e-99 | 278 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun7g01266 | K02894 | - | tcc:18613077 | 284.263 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun7g01266 | 7 | 14455081 | 14456386 | Viun7g01266 | 7 | 14455081 | 14456386 | ECH | |
Viun1g02154 | 1 | 32786768 | 32787784 | Viun7g01266 | 7 | 14455081 | 14456386 | PCT |