Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01261 ATGGCACCCAATAAAAAAGTGGTAGCGGCCTATCGTGCAATGGGAAGTCTTGGAATTGATGAGTCGAAAGTGAAATCAGCGTTAAAGAAACTCCTCAAAGTGTTTGACAAAAACTGGGAACTTATAGAGGCAGAGAACTATAGAGTTCTAGTAGATGCTATATTTGAGGAGGACGATACTATGGTGCCCGAAGTGAAAAAAAAGAAAGTCCAGTCTGACGATGTACATGACACTCATCATTCTTTGTCTTCCTTTTCAAACAACCAGGAAGAGGAGACAGAGTGTGAAGAGGCTCAGATGCATAATGAAAGAGCCCAACCTTTAAAAAGGCTCCGATTAAGAGGCCAGGACAGTCAGCCTTTGCATCCTCTGACTAACATTTCCACCAGCCCTCCTTCAAAAAGGCCAAAATTAGAAGATAATGCATTACACCAGGGTTCTTCTGGGAAGAAACCTCAAAACAAGCCAGAGTCATCTGATGGGAATCCAAGGATTGAAGCACCGTTACTTAGACCACCAGATGACATTGTTGATAAGGGAAAGCAACCTGCATCAGCCCAAGTTTTGCAAAGAGGAAGAAAACTTACTTCTGGAAGATCGTCCCCATCCACACCATCTAAAGAACGAACAGTTGAAGCGGGGAAGCTTCTGATGCCAAACAACATAATACCTCGTACTCAGGCACTTATCATACCCAAGGACGAGCCTATTGATGAAGTGCCTGATTATGCAATGCCCATTGCAGTGATTCCTCCTGAACCATCAAGCGCAAGGGACTCATCATTCAAGAACGGTGTAGCTGGAAAGCATGTCAGCCATGATGATACTGTGGCATCACCAGCACGCAGAAAAAGAGTCAGTGATGAAGATGTTCTTCCTACCTCAAATGAAGAAGCCACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAACTTTCTTTGAGCTGCAGCTCAGCACTTTGGGGATCAAATTTTCACATGCCTAGTCAAGATGAACTTATAGAAATGATGGAGGAGAAATGTTTGCGATCATATAAAATTGCTGACCCAAATTTCTCTGTCATGAAACTTTTGAGGGATGTATGCGATTGCATGTTGGAATTCAGAAACAATTCTAATAATGATCCAGAAGAAGGTTCTTTAGTGACATCCAATGTTGATGTGTCGAAGGAATCACAAGAACCTGGCACACTGAGTGTGGAAAGAAACAAAGATTTGGACATCCATTCTCATGTTTCAAATGGATCCATCAATGTTAATCCTTCTGCTGCATTGGCTTCTCCCCGAAGTTTCCTTCCTCATGCTGACCTGAATGGTCTGAATGATGCTGTCTTGGTTTCCATGAAGGACCAAACAACAAATGATTTTTCACAATGTAATGTAAAGAAGGAGCTGGAAGATTCTATGTCTCCAAATTCACATAGTTTAGTGATTGTTCCACAGCATCAGCTGACAGCTGATGATATAAGGTCTTTATATGATGTTAATGACCTTACAAAAGGAGAAGAAAATGTTGAAATTTCTTGGTTGAATGATTATACTAATGATTTCCCATCATCCTTTAACTACATACCCCGGAACCTTGTGTTCCAAGATGCTTATGTTAACATTTCTCTATCACGTATTGGCAGTGAGGACTGTTGTTCAACTTGTATGGGCAATTGTGTCTTGTCCACACCTTGTGCTTGTGCAAATAAAACTGGTGGTGAATTTGCTTATAGTTCTCAAGGCCTACTGAAGGAACAATTTTTGGAAGAGTGCATTACCATTAGTCGCAATCCACAAAACCATTTCTTTTATTGTAAAATTTGCCCACTTGAAAGATCTAAGAATGATGGTGGTTTAGAACCTTGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGCTGGAGCAAATGTGGCTGTGGAAAACAGTGTGGAAATCGGATTATCCAGCGAGGAATAACTTGCAAATTGCAGGTGTTTTTCACTTCAGAAGGTAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCTAAAGGTGCATTTGTATGTGAGTTTGTTGGAGAAATTTTATCCATTAAAGAGTTGCACGAGAGGAACATGAAATGCACTGGAAAAGGGAAACATACATACCCAGTACTACTGGATGCAAATTGGGATTCAGGATATATGAAGAACAAAGAAGCTTTATGTTTGGATTCAGCTTCGTTTGGCAACATTGCTAGGTTTATCAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGATCCTGGTCATTATTACTACCATTTTGCTTTTTTCACTTCCAGAAAAATTGCAGCACTTGAGGAGCTAACATGGGTGAGCAAGCTTGCTAGTGATTATGGCATCGACTTTGATGATCATGATCATCCTATCAAGCTATTCCAGTGCAGTTGTGGCAGTAAATTCTGCAGGCATATGAAGAGGTCAAACAGATCCAGTAGATCTGCGTCAATTTCCGGGTGA 2499 0.4086 MAPNKKVVAAYRAMGSLGIDESKVKSALKKLLKVFDKNWELIEAENYRVLVDAIFEEDDTMVPEVKKKKVQSDDVHDTHHSLSSFSNNQEEETECEEAQMHNERAQPLKRLRLRGQDSQPLHPLTNISTSPPSKRPKLEDNALHQGSSGKKPQNKPESSDGNPRIEAPLLRPPDDIVDKGKQPASAQVLQRGRKLTSGRSSPSTPSKERTVEAGKLLMPNNIIPRTQALIIPKDEPIDEVPDYAMPIAVIPPEPSSARDSSFKNGVAGKHVSHDDTVASPARRKRVSDEDVLPTSNEEATCNVEIASSTLGEVKLSLSCSSALWGSNFHMPSQDELIEMMEEKCLRSYKIADPNFSVMKLLRDVCDCMLEFRNNSNNDPEEGSLVTSNVDVSKESQEPGTLSVERNKDLDIHSHVSNGSINVNPSAALASPRSFLPHADLNGLNDAVLVSMKDQTTNDFSQCNVKKELEDSMSPNSHSLVIVPQHQLTADDIRSLYDVNDLTKGEENVEISWLNDYTNDFPSSFNYIPRNLVFQDAYVNISLSRIGSEDCCSTCMGNCVLSTPCACANKTGGEFAYSSQGLLKEQFLEECITISRNPQNHFFYCKICPLERSKNDGGLEPCKGHLKRKFIKECWSKCGCGKQCGNRIIQRGITCKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELHERNMKCTGKGKHTYPVLLDANWDSGYMKNKEALCLDSASFGNIARFINHRCFDANLVEIPVEVEDPGHYYYHFAFFTSRKIAALEELTWVSKLASDYGIDFDDHDHPIKLFQCSCGSKFCRHMKRSNRSSRSASISG 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01261 832 MobiDBLite consensus disorder prediction 146 160 - -
Viun7g01261 832 Pfam SET domain 666 784 IPR001214 GO:0005515
Viun7g01261 832 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 827 - -
Viun7g01261 832 ProSiteProfiles SET domain profile. 654 787 IPR001214 GO:0005515
Viun7g01261 832 MobiDBLite consensus disorder prediction 254 295 - -
Viun7g01261 832 Gene3D - 1 60 IPR043017 -
Viun7g01261 832 MobiDBLite consensus disorder prediction 275 292 - -
Viun7g01261 832 Pfam Pre-SET motif 502 646 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g01261 832 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 832 IPR025776 -
Viun7g01261 832 ProSiteProfiles Pre-SET domain profile. 550 651 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g01261 832 MobiDBLite consensus disorder prediction 116 212 - -
Viun7g01261 832 Gene3D SET domain 483 801 IPR046341 -
Viun7g01261 832 SMART set_7 654 799 IPR001214 GO:0005515
Viun7g01261 832 MobiDBLite consensus disorder prediction 189 208 - -
Viun7g01261 832 MobiDBLite consensus disorder prediction 66 80 - -
Viun7g01261 832 CDD SET_SETDB-like 522 793 - -
Viun7g01261 832 MobiDBLite consensus disorder prediction 376 402 - -
Viun7g01261 832 SUPERFAMILY SET domain 507 816 IPR046341 -
Viun7g01261 832 SMART preset_2 498 638 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g01261 832 Pfam Ubiquitin-binding WIYLD domain 5 59 IPR018848 -
Viun7g01261 832 MobiDBLite consensus disorder prediction 376 399 - -
Viun7g01261 832 MobiDBLite consensus disorder prediction 66 103 - -
Viun7g01261 832 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01261 Viun-Chr7 14347693 14355082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01261 630 818 C2H2 Transcription Factor Family AT2G23740 38.974 2.08e-27 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g01261 Pre-SET 3.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01261 - - vun:114190802 1661.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01261 7 14347693 14355082 Viun7g01261 7 14347693 14355082 ECH
Viun6g01664 6 24347587 24360197 Viun7g01261 7 14347693 14355082 PCT
Viun7g01261 7 14347693 14355082 Viun1g02156 1 32788838 32795859 PCT