Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01260 ATGGCACCCAATAAAAAAGTGGTAGCGGCCTATCGTGCAATGGGAAGTCTTGGAATTGATGAGTCGAAAGTGAAATCAGCGTTAAAGAAACTCCTCAAAGTGTTTGACAAAAACTGGGAACTTATAGAGGCAGAGAACTATAGAGTTCTAGTAGATGCTATATTTGAGGAGGACGATACTATGGTGCCCGAAGTGAAAAAAAAGAAAGTCCAGTCTGACGATGTACATGACACTCATCATTCTTTGTCTTCCTTTTCAAACAACCAGGAAGAGGAGACAGAGTGTGAAGAGGCTCAGATGCATAATGAAAGAGCCCAACCTTTAAAAAGGCTCCGATTAAGAGGCCAGGACAGTCAGCCTTTGCATCCTCTGACTAACATTTCCACCAGCCCTCCTTCAAAAAGGCCAAAATTAGAAGATAATGCATTACACCAGGGTTCTTCTGGGAAGAAACCTCAAAACAAGCCAGAGTCATCTGATGGGAATCCAAGGATTGAAGCACCGTTACTTAGACCACCAGATGACATTGTTGATAAGGGAAAGCAACCTGCATCAGCCCAAGTTTTGCAAAGAGGAAGAAAACTTACTTCTGGAAGATCGTCCCCATCCACACCATCTAAAGAACGAACAGTTGAAGCGGGGAAGCTTCTGATGCCAAACAACATAATACCTCGTACTCAGGCACTTATCATACCCAAGGACGAGCCTATTGATGAAGTGCCTGATTATGCAATGCCCATTGCAGTGATTCCTCCTGAACCATCAAGCGCAAGGGACTCATCATTCAAGAACGGTGTAGCTGGAAAGCATGTCAGCCATGATGATACTGTGGCATCACCAGCACGCAGAAAAAGAGTCAGTGATGAAGATGTTCTTCCTACCTCAAATGAAGAAGCCACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAACTTTCTTTGAGCTGCAGCTCAGCACTTTGGGGATCAAATTTTCACATGCCTAGTCAAGATGAACTTATAGAAATGATGGAGGAGAAATGTTTGCGATCATATAAAATTGCTGACCCAAATTTCTCTGTCATGAAACTTTTGAGGGATGTATGCGATTGCATGTTGGAATTCAGAAACAATTCTAATAATGATCCAGAAGAAGGTTCTTTAGTGACATCCAATGTTGATGTGTCGAAGGAATCACAAGAACCTGGCACACTGAGTGTGGAAAGAAACAAAGATTTGGACATCCATTCTCATGTTTCAAATGGATCCATCAATGTTAATCCTTCTGCTGCATTGGCTTCTCCCCGAAGTTTCCTTCCTCATGCTGACCTGAATGGTCTGAATGATGCTGTCTTGGTTTCCATGAAGGACCAAACAACAAATGATTTTTCACAATGTAATGTAAAGAAGGAGCTGGAAGATTCTATGTCTCCAAATTCACATAGTTTAGTGATTGTTCCACAGCATCAGCTGACAGCTGATGATATAAGGTCTTTATATGATGTTAATGACCTTACAAAAGGAGAAGAAAATGTTGAAATTTCTTGGTTGAATGATTATACTAATGATTTCCCATCATCCTTTAACTACATACCCCGGAACCTTGTGTTCCAAGATGCTTATGTTAACATTTCTCTATCACGTATTGGCAGTGAGGACTGTTGTTCAACTTGTATGGGCAATTGTGTCTTGTCCACACCTTGTGCTTGTGCAAATAAAACTGGTGGTGAATTTGCTTATAGTTCTCAAGGCCTACTGAAGGAACAATTTTTGGAAGAGTGCATTACCATTAGTCGCAATCCACAAAACCATTTCTTTTATTGTAAAATTTGCCCACTTGAAAGATCTAAGAATGATGGTGGTTTAGAACCTTGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGCTGGAGCAAATGTGGCTGTGGAAAACAGTGTGGAAATCGGATTATCCAGCGAGGAATAACTTGCAAATTGCAGGTGTTTTTCACTTCAGAAGGTAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCTAAAGGTGCATTTGTATGTGAGTTTGTTGGAGAAATTTTATCCATTAAAGAGTTGCACGAGAGGAACATGAAATGCACTGGAAAAGGGAAACATACATACCCAGTACTACTGGATGCAAATTGGGATTCAGGATATATGAAGAACAAAGAAGCTTTATGTTTGGATTCAGCTTCGTTTGGCAACATTGCTAGGTTTATCAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGATCCTGGTCATTATTACTACCATTTTGCTTTTTTCACTTCCAGAAAAATTGCAGCACTTGAGGAGCTAACATGGGATTATGGCATCGACTTTGATGATCATGATCATCCTATCAAGCTATTCCAGTGCAGTTGTGGCAGTAAATTCTGCAGGCATATGAAGAGGTCAAACAGATCCAGTAGATCTGCGTCAATTTCCGGGTGA 2481 0.4079 MAPNKKVVAAYRAMGSLGIDESKVKSALKKLLKVFDKNWELIEAENYRVLVDAIFEEDDTMVPEVKKKKVQSDDVHDTHHSLSSFSNNQEEETECEEAQMHNERAQPLKRLRLRGQDSQPLHPLTNISTSPPSKRPKLEDNALHQGSSGKKPQNKPESSDGNPRIEAPLLRPPDDIVDKGKQPASAQVLQRGRKLTSGRSSPSTPSKERTVEAGKLLMPNNIIPRTQALIIPKDEPIDEVPDYAMPIAVIPPEPSSARDSSFKNGVAGKHVSHDDTVASPARRKRVSDEDVLPTSNEEATCNVEIASSTLGEVKLSLSCSSALWGSNFHMPSQDELIEMMEEKCLRSYKIADPNFSVMKLLRDVCDCMLEFRNNSNNDPEEGSLVTSNVDVSKESQEPGTLSVERNKDLDIHSHVSNGSINVNPSAALASPRSFLPHADLNGLNDAVLVSMKDQTTNDFSQCNVKKELEDSMSPNSHSLVIVPQHQLTADDIRSLYDVNDLTKGEENVEISWLNDYTNDFPSSFNYIPRNLVFQDAYVNISLSRIGSEDCCSTCMGNCVLSTPCACANKTGGEFAYSSQGLLKEQFLEECITISRNPQNHFFYCKICPLERSKNDGGLEPCKGHLKRKFIKECWSKCGCGKQCGNRIIQRGITCKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELHERNMKCTGKGKHTYPVLLDANWDSGYMKNKEALCLDSASFGNIARFINHRCFDANLVEIPVEVEDPGHYYYHFAFFTSRKIAALEELTWDYGIDFDDHDHPIKLFQCSCGSKFCRHMKRSNRSSRSASISG 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01260 826 Gene3D - 1 60 IPR043017 -
Viun7g01260 826 MobiDBLite consensus disorder prediction 146 160 - -
Viun7g01260 826 MobiDBLite consensus disorder prediction 254 295 - -
Viun7g01260 826 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 826 IPR025776 -
Viun7g01260 826 MobiDBLite consensus disorder prediction 275 292 - -
Viun7g01260 826 Pfam Pre-SET motif 502 646 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g01260 826 ProSiteProfiles Pre-SET domain profile. 550 651 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g01260 826 MobiDBLite consensus disorder prediction 116 212 - -
Viun7g01260 826 Pfam SET domain 666 787 IPR001214 GO:0005515
Viun7g01260 826 MobiDBLite consensus disorder prediction 189 208 - -
Viun7g01260 826 MobiDBLite consensus disorder prediction 376 402 - -
Viun7g01260 826 SUPERFAMILY SET domain 507 810 IPR046341 -
Viun7g01260 826 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 821 - -
Viun7g01260 826 SMART preset_2 498 638 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun7g01260 826 Pfam Ubiquitin-binding WIYLD domain 5 59 IPR018848 -
Viun7g01260 826 MobiDBLite consensus disorder prediction 67 103 - -
Viun7g01260 826 MobiDBLite consensus disorder prediction 376 399 - -
Viun7g01260 826 SMART set_7 654 793 IPR001214 GO:0005515
Viun7g01260 826 Gene3D SET domain 483 797 IPR046341 -
Viun7g01260 826 ProSiteProfiles SET domain profile. 654 787 IPR001214 GO:0005515
Viun7g01260 826 CDD SET_SETDB-like 522 787 - -
Viun7g01260 826 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01260 Viun-Chr7 14347688 14355082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01260 630 812 C2H2 Transcription Factor Family AT2G23740 40.212 3.80e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun7g01260 Pre-SET 3.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01260 - - vun:114190802 1645.17