Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01254 ATGGTTGACAAATGGCACGGTATTGTTTCGTGGACTTGGGATGCTCAAGATGAAACGTGTGGGATCTGTAGAATGGCCTTTGATGGATGTTGTCCAGACTGTAAACTTCCAGGGGATGACTGTCCTCTGATTTGGGGTGTATGCAATCATGCGTTTCATTTGCACTGTATCCTGAAATGGGTTAATTCTCAAACATCACAAGCGCATTGCCCCATGTGCCGTCGTGAATGGCAGTTTAAAGGATAA 246 0.4512 MVDKWHGIVSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01254 81 FunFam Anaphase-promoting complex subunit 11 1 81 - -
Viun7g01254 81 CDD RING-H2_APC11 17 79 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Viun7g01254 81 ProSiteProfiles Zinc finger RING-type profile. 31 74 IPR001841 -
Viun7g01254 81 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 2 80 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Viun7g01254 81 PANTHER RING BOX 2 80 - -
Viun7g01254 81 SUPERFAMILY RING/U-box 2 80 - -
Viun7g01254 81 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 81 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01254 Viun-Chr7 14297950 14300219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01254 31 74 C3H Transcription Factor Family AT1G72220 41.304 1.91e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01254 K03358 - gmx:100776546 186.808