Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01249 ATGAAAGTGAAGATCTTGCATTGGGTACTCCTGATTTTCCGAAAAGAATGGCACGGTATTGTTTCGTGGACTTGGGATGCTCAAGATGAAACGTGTGGGATCTGTAGAATGGCCTTTGATGGATGTTGTCCAGACTGTAAACTTCCAGGGGATGACTGTCCTCTGATTTGGGGTGTATGCAATCATGCGTTTCATTTGCACTGTATCCTGAAATGGGTTAATTCTCAAACATCACAAGCGCATTGCCCCATGTGCCGTCGTGAATGGCAGTTTAAAGGATAA 282 0.4433 MKVKILHWVLLIFRKEWHGIVSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01249 93 CDD RING-H2_APC11 29 91 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Viun7g01249 93 FunFam Anaphase-promoting complex subunit 11 1 93 - -
Viun7g01249 93 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 93 IPR013083 -
Viun7g01249 93 SUPERFAMILY RING/U-box 15 92 - -
Viun7g01249 93 ProSiteProfiles Zinc finger RING-type profile. 43 86 IPR001841 -
Viun7g01249 93 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 15 92 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Viun7g01249 93 PANTHER RING BOX 15 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01249 Viun-Chr7 14282095 14284954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01249 43 86 C3H Transcription Factor Family AT1G72220 41.304 8.29e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01249 K03358 - gmx:100776546 195.282