Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01243 ATGAAAGTGAAGATCTTGCTACTCCTGATTTTCCGAAAAGAATGGCACGGTATTGTTTCGTGGACTTGGGATGCTCAAGATGAAACGTGTGGGATCTGTAGAATGGCCTTTGATGGATGTTGTCCAGACTGTAAACTTCCAGGGGATGACTGTCCTCTGATTTGGGGTGTATGCAATCATGCGTTTCATTTGCACTGTATCCTGAAATGGGTTAATTCTCAAACATCACAAGCGCATTGCCCCATGTGCCGTCGTGAATGGCAGTTTAAAGGATAA 276 0.442 MKVKILLLLIFRKEWHGIVSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01243 91 SUPERFAMILY RING/U-box 13 90 - -
Viun7g01243 91 CDD RING-H2_APC11 27 89 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Viun7g01243 91 FunFam Anaphase-promoting complex subunit 11 1 91 - -
Viun7g01243 91 ProSiteProfiles Zinc finger RING-type profile. 41 84 IPR001841 -
Viun7g01243 91 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 13 90 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Viun7g01243 91 PANTHER RING BOX 13 90 - -
Viun7g01243 91 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 91 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01243 Viun-Chr7 14266356 14269168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01243 41 84 C3H Transcription Factor Family AT1G72220 41.304 9.06e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01243 K03358 - gmx:100776546 195.282