Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01238 ATGTCAACTGTGTCCAAAGATGACAACTTGGTGCTGTCTTCGGAGGACTCTTCTTGCCCAGAAGAGTCTGAGATCGAATTGGGTCTTGGGTTGAGCATCTCAGGCCCTTCTAAGTCTCACCACCATGTCCATGCTCATGCTCCTTCTCCTTATGCTAGGATTTTCAGTTCCAAGGCTTTTCCTTCTTCACCATCACCATCACCTTCCTCTTCTTCCTCTTCCTCTCCCAACATCACTGCTGGCACCAAGAGAGCTGCTGAATCTCTTGTTGCAAATAATCGTCCTAGTCAAGTAGTTGGATGGCCTCCACTTCGGACATATAGAGTGAATAGCTACAACATCCATGCCAAATCAACAGAAGTATTCGACTCAGTGACTGAGAAGACTAAAGGCAACAATACTGTGGTAAGGAAAAGTGCTGACAATGGCAATGATAACAACATTAATGCCAAAGAAAAAAGACAGCTCAGGAGTTCCCTGTTCGTCAAGGTAAATATGGATGGGATACCTATTGGGAGGAAGGTTGATTTGAGCTCTCATAGTTCCTATGAAACCTTAGCACAAACGTTGGAGGACATGTTTAACGAATCAACTACAGTCACCACTTGCAAAGGAGCAAATGGTGAGGATCATGGAATTATTATTGGAGGAGAAAGGCATTCAAAATTGTTGGATGGATCATCCAAGTTTGTGCTCACTTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCCTTAGCTCGGTGAGGAGGCTAAGAATAATGAGGACATCTGAGGCTAATGGACTTGCCCCAAGATTGGAAGAAAACATCAGACAGAAATGCAAGCCCATATAG 858 0.4417 MSTVSKDDNLVLSSEDSSCPEESEIELGLGLSISGPSKSHHHVHAHAPSPYARIFSSKAFPSSPSPSPSSSSSSSPNITAGTKRAAESLVANNRPSQVVGWPPLRTYRVNSYNIHAKSTEVFDSVTEKTKGNNTVVRKSADNGNDNNINAKEKRQLRSSLFVKVNMDGIPIGRKVDLSSHSSYETLAQTLEDMFNESTTVTTCKGANGEDHGIIIGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEENIRQKCKPI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01238 285 SUPERFAMILY CAD & PB1 domains 154 262 - -
Viun7g01238 285 Gene3D - 154 276 - -
Viun7g01238 285 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 269 IPR003311 GO:0005634|GO:0006355
Viun7g01238 285 FunFam Auxin-responsive protein 154 274 - -
Viun7g01238 285 MobiDBLite consensus disorder prediction 1 91 - -
Viun7g01238 285 Pfam AUX/IAA family 71 273 IPR033389 -
Viun7g01238 285 MobiDBLite consensus disorder prediction 56 82 - -
Viun7g01238 285 MobiDBLite consensus disorder prediction 1 18 - -
Viun7g01238 285 ProSiteProfiles PB1 domain profile. 159 266 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01238 Viun-Chr7 14217376 14222929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01238 152 283 B3 DNA Binding Superfamily AT1G59750 34.328 6.91e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun7g01238 AUX_IAA 1.5e-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01238 K14484 - gmx:100779400 457.218