Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01237 ATGCAGCTGAAAACTCAGTTTTTCTTCTACTTCTGTTGCATGTGCTGTTTCTCATATGGCTTTGCAGCTGCAGAAAATGATGAAGCTTCTGCTTTACTTTCTATAAAAGCAGGTCTGATTGATCCATTCAATAGCCTTCTTGATTGGAAATTGTTGGACAAAGCAAAAGGGAAGGGTGCAGCTCATTGTAACTGGACTGGTGTCCAGTGCAACTCAGGTGGAGAAGTAGAGAGCCTTGATCTCTCCCGCATGAATCTGAGTGGAATTGTGTCCAATCAGATACAAAGGCTAGAGAGTCTTACTTCTCTCAACTTGTGTTGCAACCAATTTTCCTCTTCATTATCATCCATACCCAATCTCACCACACTGAAGACTCTTGATGTGAGCCAGAATTTCTTCACTGGTCACTTTCCATTAGGCCTTGGAAAGGCATTGGGACTTATGACCTTAAATGCATCCAGCAACAATTTCTCTGGCTTTCTTCCTGAGGATCTGGGAAATGTCTCTTCCTTGGAGACTTTGGATTTCAGAGGCAGCTTCTTTGAAGGGTCAGTTCCAAAATCCTTCGGTAATTTGCACAGGCTGAAGTTCCTCGGTTTATCTGGGAATAATCTCACTGGAGAAATCCCCGGAGAGTTGGGCCAACTTTCATCACTGGAGTGCATGATCATTGGATACAATGAATTTGAAGGTGGTATTCCAGCCGAGTTTGGAAATCTGACCAAGTTAAAGTATCTTGATTTAGCAGAAGGCAATCTTGGTGGTGAAATTCCAGCCGAGTTGGGAAAGCTCAAGCTGTTGAATACAGTTTTCTTGTACAAAAACAAATTAGAAGGCAATATTCCACCGACAATTGGCACCATGACTTCATTGGTGCAGCTGGATCTCTCAGACAACATGTTATCAGGAAATATACCGGCCGAAATAAGTGAGCTGAAGAATTTACAGCTTCTGAACTTCATGCGTAACCGGCTATCTGGTCCTGTGCCTTCTGGCCTTGGAGACTTGCCTCAACTTGAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGGTCATTGCCTAGAAACCTTGGCAAGAATTCACCGTTGCAGTGGTTGGATGTATCATCTAATTTGCTCTCTGGTGAGATTCCGGAAACTCTTTGCACCAAAGGCTATCTCACCAAGCTCATACTTTTCAATAATGCCTTCGTGGGTCCAATTCCAGCAAGCCTATCAACATGTCCTTCGATTGTCCGTGTTCGAATTCAGAACAATTTTCTTTCTGGGACAATTCCTGTGGGCCTTGGTAAGCTTAGGAAGCTTCAGAGGTTAGAATTAGCAAACAATAGTCTCACCGGTGGAATTCCTAATGACATTGGTTCTTCTACATCCCTTTCTTTCATTGATTTTTCCACAAACAATCTCCACTCTTCTCTTCCTTCAACCATTATTTCCCTTCCAAATCTTCAAACTTTAATTGTCTCGAACAACAACTTGAGAGGTGAAATCCCAGACGAATTCCAGGATTGTCCCTCACTAGGTGTCCTTGATCTCTCATCGAATGGACTCTCTGGAGGCATTCCAGCAAGCCTTGCATCATGCCAGAAATTGGTAAACTTGAACCTACAGAACAACCAATTGACGGGTGAAATCCCAAAAGCATTAGCCAGCATGCCTACATTGGCCATTCTTGATCTTGCCAACAACTCTCTGAGTGGTCAAATACCTGGAAACTTTGGTAGTTCTCCAGCTCTGGAAACATTCAACGTCTCGCACAACAAGCTACAAGGTCCTGTCCCAGAAAACGGAGTGCTAAGAACAATAAACCCAAATGATCTTGCGGGGAATGCCGGGTTATGTGGTGCTGTCCTCCCCCCATGTGGCCAAATCTCTGCATATCCGTCAAGGCGTGGGAGCACATATGCAAAGCACATTATTGTAGGATGGATCATTGGAATATCATCAATACTAGCCATTGGGGTTACAACTGTGGTAGCAAGATGTTTATACATAAGGTGGTACACTGAGGGATTGTGCTTCCAGGAAAGATTTTATAAGGGTAGGAAGGGGTGGCCATGGAGATTGATGGCCTTTCAGAGGCTTGATTTTACAAGTAGTGACATTTTATCTTGCATCAAGGATACAAATATGATTGGTATGGGAGCGACTGGGATTGTCTACAAGGCTGAGATACCACAATCTAGTACAATCGTGGCTGTGAAGAAGTTGTGGAGATCAGGATCTGATATCGAAGTAGGAAGCAGTGATGAGCTTGTTGGTGAGGTGAATCTTTTAGGGAGGTTAAGGCATAGGAACATTGTAAGACTATTGGGATTTCTTTACAATGACGCTGATGTGATGATAGTTTATGAATTTATGCACAATGGAAACCTTGGAGATGCCCTGCATGGTAAACAAGCTGGGAGATTACTTGTAGACTGGGTTTCCCGATATAACATAGCTCTAGGAATTGCAGAAGGACTTGTTTATCTTCATCATGATTGTCATCCACCTGTTATCCATCGAGACATTAAGTCAAATAATATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGGTTGGCCAAGATGATGCTCCGGAAGAATGAAACAGTCTCCATGATTGCTGGATCTTATGGATACATTGCCCCTGAATATGGATACTCCTTGAAAGTGGATGAAAAGATTGACATTTACAGTTATGGAGTGGTTCTGTTGGAGCTTCTGACTGGAAAGCGGCCCTTAGATCCCGAGTTTGGTGAATCTATAGACATAGTAGGGTGGATTAGAAGGAAGATAGACAAAAAATCTCCCCATGAAGCATTAGACCCAAGTGTAGGAAACTGTAAGTATGTTCAAGAAGAGATGCTTTTAGTTCTCAAGATAGCACTTCTATGCACTGCCAAGTTCCCCAAGGACAGACCCTCCATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTAGGAGAAAAAGTGGCAGAAGCAGTGAAACATTTTCGGCTAACAAGGAAATCCCAGCTACTATTAGGACACCACCAGTTAATGGCCTTCTTTAG 3051 0.431 MQLKTQFFFYFCCMCCFSYGFAAAENDEASALLSIKAGLIDPFNSLLDWKLLDKAKGKGAAHCNWTGVQCNSGGEVESLDLSRMNLSGIVSNQIQRLESLTSLNLCCNQFSSSLSSIPNLTTLKTLDVSQNFFTGHFPLGLGKALGLMTLNASSNNFSGFLPEDLGNVSSLETLDFRGSFFEGSVPKSFGNLHRLKFLGLSGNNLTGEIPGELGQLSSLECMIIGYNEFEGGIPAEFGNLTKLKYLDLAEGNLGGEIPAELGKLKLLNTVFLYKNKLEGNIPPTIGTMTSLVQLDLSDNMLSGNIPAEISELKNLQLLNFMRNRLSGPVPSGLGDLPQLEVLELWNNSLSGSLPRNLGKNSPLQWLDVSSNLLSGEIPETLCTKGYLTKLILFNNAFVGPIPASLSTCPSIVRVRIQNNFLSGTIPVGLGKLRKLQRLELANNSLTGGIPNDIGSSTSLSFIDFSTNNLHSSLPSTIISLPNLQTLIVSNNNLRGEIPDEFQDCPSLGVLDLSSNGLSGGIPASLASCQKLVNLNLQNNQLTGEIPKALASMPTLAILDLANNSLSGQIPGNFGSSPALETFNVSHNKLQGPVPENGVLRTINPNDLAGNAGLCGAVLPPCGQISAYPSRRGSTYAKHIIVGWIIGISSILAIGVTTVVARCLYIRWYTEGLCFQERFYKGRKGWPWRLMAFQRLDFTSSDILSCIKDTNMIGMGATGIVYKAEIPQSSTIVAVKKLWRSGSDIEVGSSDELVGEVNLLGRLRHRNIVRLLGFLYNDADVMIVYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGIAEGLVYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMLRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLDPEFGESIDIVGWIRRKIDKKSPHEALDPSVGNCKYVQEEMLLVLKIALLCTAKFPKDRPSMRDVIMMLGEAKPRRKSGRSSETFSANKEIPATIRTPPVNGLL 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01237 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 365 625 - -
Viun7g01237 1016 FunFam MDIS1-interacting receptor like kinase 1 791 1000 - -
Viun7g01237 1016 Pfam Leucine rich repeat 530 589 IPR001611 GO:0005515
Viun7g01237 1016 Pfam Leucine rich repeat 463 517 IPR001611 GO:0005515
Viun7g01237 1016 SUPERFAMILY Protein kinase-like (PK-like) 701 981 IPR011009 -
Viun7g01237 1016 Pfam Leucine Rich Repeat 434 454 IPR001611 GO:0005515
Viun7g01237 1016 ProSitePatterns Protein kinases ATP-binding region signature. 712 736 IPR017441 GO:0005524
Viun7g01237 1016 Gene3D Transferase(Phosphotransferase) domain 1 791 1004 - -
Viun7g01237 1016 ProSiteProfiles Protein kinase domain profile. 706 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01237 1016 SMART serkin_6 706 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01237 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 180 280 - -
Viun7g01237 1016 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 231 981 - -
Viun7g01237 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Viun7g01237 1016 Gene3D Ribonuclease Inhibitor 178 275 IPR032675 -
Viun7g01237 1016 Gene3D Ribonuclease Inhibitor 24 177 IPR032675 -
Viun7g01237 1016 SMART LRR_typ_2 288 312 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 240 264 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 97 120 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 480 503 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 336 360 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 432 456 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 552 576 IPR003591 -
Viun7g01237 1016 SMART LRR_typ_2 192 216 IPR003591 -
Viun7g01237 1016 Gene3D Phosphorylase Kinase; domain 1 706 790 - -
Viun7g01237 1016 Gene3D Ribonuclease Inhibitor 276 383 IPR032675 -
Viun7g01237 1016 FunFam Leucine-rich repeat receptor protein kinase EMS1 281 364 - -
Viun7g01237 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 25 179 - -
Viun7g01237 1016 SUPERFAMILY L domain-like 62 350 - -
Viun7g01237 1016 Pfam Protein kinase domain 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01237 1016 SUPERFAMILY RNI-like 257 595 - -
Viun7g01237 1016 FunFam MDIS1-interacting receptor like kinase 1 706 790 - -
Viun7g01237 1016 Gene3D Ribonuclease Inhibitor 384 625 IPR032675 -
Viun7g01237 1016 Pfam Leucine rich repeat N-terminal domain 26 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01237 Viun-Chr7 14213377 14217086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01237 7 1016 Receptor kinase-like Gene Family AT1G08590 60.155 0.0 1164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun7g01237 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01237 - - gmx:100788430 1801.95