Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01236 ATGATAACACACCCAAAGATCAGAATGGCCGTGTTCTCCTGCATGCTAATTATCTTTCTTTGTTTTCCGTTTCTAAAATTTATATCTGTAGCCACCGCCCAGAAGCACGTATGTGATAACGGCAAGGGCAACTACACGGCCAACAGCACCTACAGCACCAACCTCAACAACCTTTTATCCACTCTCTATTCCAACACCCAAATCAACTACGGTTTCTACAACTTTTCATATGCCCATAACACTGACACGGTAAACGCCATAGGACTCTGTAGAGGCGATGTTGAGTCAGACAAGTGCCGCAGCTGCCTCAAAAACTCCACACTCGACATAAAACAGAGATGTCCAAACCAGAAAAAGGCAATTATGTGGTCCGATCTATGCATGCTACGATACTCTAACGAAACAATGTTCCATAAAATGGAAACTTTTCCTGGTTATTACTGGTGGAACTTAGAAAATGTAACGGAACCGGATCAGTTCAGCCAAGTGCTCGGGAACTTAATGAAGACCCTAAGAGGCATAGCTGCATCAGGTGACTCCCGTCGTAAGTATGCTGCGGCAGAAAATTCAACAAATTTTCAAAACGTATACGGTGCTGTGCAGTGCACCCCTGATTTGTCTCACCAACAATGTAATCAATGCTTAGAGGGGGCTATCTCGGAGATCCCAACCTGCTGCAATGGCAAGGTAGGTGGTAGAGTTCTTAGACCAAGTTGTAATATTAGATTCGAAACTTACAGCTTCTACGGAACTCCAACAACATTAGACCCGGTTCCAGAGTCACCTCCTCCATCCACCAATACCATTTCCTCACAAGAAAGTGGCAACACAACAATAATTGTCATTGCCGTAGTTGTGCCTACTGTTGTTGTCGTTGTTGTTTTGCTCATCTGTCTCTTCCTATGTTTAAGGAGGAGGAAGGCAAGGAAAAATCTTGCAGGTGAAGTTAAAGAACAAGATGATGAAGATGAGGATGAAATTAAAATTGCTGACTCATTGCATTTCAGCTTTGACACGATACGAGTTGCTACCGAGGACTTCTCTGATTCTAAAAAACTTGGACAAGGTGGATTTGGAGCTGTTTACCGGGGTAGACTCCCCAATGGACAGATAATTGCAGTGAAAAGGTTGTCAAGAGATTCTGGGCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTAGTGGTGAAGCTTCAACACCGGAATTTAGTTAGGCTACTGGGTTTCTGTTTGGAAGGAAGAGAAAGACTACTCATCTATGAATTTGTTCCCAACAAAAGCCTTGATTATTTCATATTTGATCCAGCCGTGAAGGCACAGTTGGATTGGGAAAAGCGCTACAAAATCATTAGAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTTGTTTTAATGGATCAAACTCAAGTAAACACAAATAGAATTGTTGGAACCTATGGATACATGGCACCGGAGTATGCAATGCATGGACAGTTTTCAGTGAAATCGGATGTGTACAGTTTCGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAGTAATGGGGAGAGTATGGAGGATCTATTAAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTGTAAATATTGTAGATCCATCACTTAATAGCAGTTCACGCAATGAAATGTTAAGATGCTTGCATATTGGTTTACTATGTGTTCAAGAAAATTTAGTAGACAGACCAACCATGGCTAGCATTATACTCATGCTTAATAGCCATTCTCTGAGTCTCCCTATTCCTGCAGAACCAGCATTTTACTTTAACAACAGAACTAGAAGCTTTCCAGAGATGCAGTCATGGGAGTATAATTCAAGGGGAACAGGATCACGTGAAGCGATACTTAAATCAGCTCAGGAATCAGAAAATGAAGCTTCAATTACTGAGTTATACCCTCGCTAA 2040 0.4201 MITHPKIRMAVFSCMLIIFLCFPFLKFISVATAQKHVCDNGKGNYTANSTYSTNLNNLLSTLYSNTQINYGFYNFSYAHNTDTVNAIGLCRGDVESDKCRSCLKNSTLDIKQRCPNQKKAIMWSDLCMLRYSNETMFHKMETFPGYYWWNLENVTEPDQFSQVLGNLMKTLRGIAASGDSRRKYAAAENSTNFQNVYGAVQCTPDLSHQQCNQCLEGAISEIPTCCNGKVGGRVLRPSCNIRFETYSFYGTPTTLDPVPESPPPSTNTISSQESGNTTIIVIAVVVPTVVVVVVLLICLFLCLRRRKARKNLAGEVKEQDDEDEDEIKIADSLHFSFDTIRVATEDFSDSKKLGQGGFGAVYRGRLPNGQIIAVKRLSRDSGQGDTEFKNEVLLVVKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPAVKAQLDWEKRYKIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDEEMNPKIADFGMARLVLMDQTQVNTNRIVGTYGYMAPEYAMHGQFSVKSDVYSFGVLILEIVSGQKNSGISNGESMEDLLSFAWRNWKEGKAVNIVDPSLNSSSRNEMLRCLHIGLLCVQENLVDRPTMASIILMLNSHSLSLPIPAEPAFYFNNRTRSFPEMQSWEYNSRGTGSREAILKSAQESENEASITELYPR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01236 679 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Viun7g01236 679 ProSiteProfiles Gnk2-homologous domain profile. 142 248 IPR002902 -
Viun7g01236 679 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Viun7g01236 679 FunFam Cysteine-rich receptor-like protein kinase 10 144 248 - -
Viun7g01236 679 FunFam Cysteine-rich receptor-like protein kinase 10 307 422 - -
Viun7g01236 679 Gene3D - 30 135 IPR038408 -
Viun7g01236 679 Gene3D - 144 248 IPR038408 -
Viun7g01236 679 SMART serkin_6 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01236 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Viun7g01236 679 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Viun7g01236 679 Gene3D Transferase(Phosphotransferase) domain 1 423 624 - -
Viun7g01236 679 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Viun7g01236 679 SUPERFAMILY Protein kinase-like (PK-like) 331 617 IPR011009 -
Viun7g01236 679 FunFam cysteine-rich receptor-like protein kinase 10 423 624 - -
Viun7g01236 679 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 675 - -
Viun7g01236 679 Pfam Protein tyrosine and serine/threonine kinase 350 614 IPR001245 GO:0004672|GO:0006468
Viun7g01236 679 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01236 679 CDD STKc_IRAK 353 618 - -
Viun7g01236 679 Pfam Salt stress response/antifungal 153 246 IPR002902 -
Viun7g01236 679 Pfam Salt stress response/antifungal 38 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01236 Viun-Chr7 14172756 14175830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01236 15 679 Receptor kinase-like Gene Family AT4G21410 48.476 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g01236 PK_Tyr_Ser-Thr 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01236 - - gmx:100782800 939.102