Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01231 ATGGGTGTCGCACGATTTTTCCATCATGTTCTGGGATTGTCCGTGTTGGAACTTGCGACAATCTGCGTCAACCTCACTTTTGTTCTTTTGTTTCTCTTTGTTGTCTCGGTGAGGCGTGCTATTGTGTACCAGGGTGGATTGCGATTTGGTAAGAATGGGGACAGCGGCAATGCCAGCCCAATCTGTAGTGTCATTGATGAAGAAACGCGTGGTGTTAGAATCGGTTTGGTGTTCAAGTTGTCAGTGGTGTCTTGTTTCTATGTTTTGATTGTGCATGTTTTGGCCTTGGGGTTCGAAGGGGGTGCTCTAGTTTGGGGTGAGGCTGACGTGGATTTGTCTCTTCTCTCTGTGCCTGCTGCACAGGTTTTGGCTTGGTTTGTGTTGAGCTTCTCGGCCTTGCATTGCAAGTTCAAGGTGTCAGAGAGGTTTCCAGTTTTGTTGAGAGTTTGGTGGTTTTTGTCCTTTGTTATTTGCTTGTGTACTTTGTATGTTGATGGGAGAGGGTTTTGGGAGGATGGTTTTCAACATCTATGTTCTCGTGCCGTCTCAAATGTTGCTGCCACTCCACCTCTTGCATTCTTGTTTGTGGTTGCAGTCAGGGGTGACACTGGTATAAGAGTTTGTCGGAACTCTGATCTTCAAGAGCCATTACTCGTTGAGGAGGAACCCGGGTGTCTCAGGGTTACTCCTTATAGAGATGCTGGAATTTTTAGTTTGGTAACTCTTTCTTGGCTGAATCCACTTCTTTCAGTTGGTGCTAAGAGACCACTTGAGCTTAAGGACATTCCACTCGTTGCACCAAGAGACAGAGCTAAGACTAGTTATAAGATTCTGAATTCTAATTGGGAGAGATTGAAAGCTGAAAATGACAATCCCTCTAAGCAACCTTCTTTGGCATGGGCGATTCTCAAGTCATTCTGGAAAGAGGCAGCTTTGAATGCTATCTTTGCTGGTTTGAATACTTTGGTGTCATATGTAGGGCCTTACATGATAAGTTACTTTGTGGATTACTTGGGTGGCAAGGAGACCTTCCCCAATGAGGGATATACCCTTGCTGGTATATTTTTTGTGTCGAAGCTTGTGGAGACTGTGACAACTAGGCAGTGGTATCTAGGAGTGGATATCTTGGGCATGCATGTTAGGTCAGCCCTAACTGCTATGGTATATAGAAAGGGACTCAGACTATCAAGCTCTGCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAACTACATGGCTGTTGATGTTCAGAGGGTCGGGGACTTCTCTTGGTACCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTTGCCCTTTTTATTCTGTATAAGAATATCGGAATTGCTTCTATCGCAACATTGATTGCTACTATCGTTTCCATTGTTGTCACGGTTCCTGTGGCTAGGATACAAGAAGATTATCAGGACAAATTGATGACTGCCAAAGATGAAAGGATGAGAAAGACATCAGAGTGTCTTAGGAACATGAGGATTCTCAAGCTGCAAGCTTGGGAGGACAGATACCGATTGAAGTTGGAGGAAATGCGTGGAGTAGAGTACAAGTGGCTAAGGAAAGCACTCTACTCTCAGGCTTTCATAACTTTCATATTCTGGAGCTCCCCTATATTTGTTTCAGTTGTCACTTTCGCTACTTCCATATTGTTGGGGGGCCAGTTGACTGCTGGTGGCGTTCTCTCTGCTCTAGCTACTTTCAGAATTCTCCAAGAACCTCTGAGGAATTTTCCTGACTTGGTGTCAACCATGGCTCAGACAAAAGTTTCTACTGATCGCATATCTACTTTCCTTCAGGATGAAGAATTGCAGGAAGATGCCACTATCATAATGCCGCGTGACCTTTCTAACATGGCCGTAGAAATCAGGGATGGTGTCTTCTGCTGGGACTCTTCTTTGCCTAGGCCTACTCTATCAGGAATACATATGAAAGTGGAAAAGGGGATGAGCGTGGCTGTTTGTGGCATGGTCGGTTCTGGCAAGTCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCCAAGCTGTCTGGTGAAGTAAAAGTGTGTGGTTCTGTTGCATACGTCCCCCAATCTGCTTGGATTCAGTCAGGAAATATAGAAGAAAATATCCTGTTTGGCTCCCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGATCTAGAGCTTTTCTCACATGGAGACCAGACAATTATTGGTGACAGAGGTATAAATTTGAGCGGTGGCCAGAAGCAGCGCGTTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTACCTCCTTGATGATCCCTTCAGTGCAGTTGATGCCCACACTGGATCGGAATTATTTAGGGAGTATGTATTGACAGCACTAGCAAATAAGACAGTTATTTTTGTGACCCATCAAGTTGAATTTCTCCCTTCTGCTGATATGATACTGGTTCTTAAAGAAGGTCATATCATACAGGCAGGAAAATATGATGATCTTTTACAAGCAGGAACAGATTTCAAAACTCTAGTTTCGGCTCACCATGAAGCAATAGAGGCCATGGATATTCCTAATCACTCAGACGATTCAGATGAAAATGTACCTTTGGAGGAATCTATTATGAACAGTAAGACATCCATTTCTTCTGCATATGATATTGACAGTTTGGCAAAGGAAGTTCAAGAGGGATCATCGGATCAGAAAGCAATTAAGGAGAAGAAGAAAGCAAAACGCTCAAGGAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTCAGCATGATGGTCTACTGGTCGTACATGGCTGCAGCATATAAAGGTTTATTGATTCCACTCATAGTCATGGCACAAACATTATTTCAGTTCCTCCAGATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAGGGAGACCAGCCCAGAGTAACACCTACTGTTCTTCTTCTTGTGTACATGGCCCTCGCTTTTGGGAGCTCATGGTTTATTTTTGTAAGGGCTGTTCTCGTGGCTACATTTGGTCTAGCAGCTGCACAGAAGCTTTTCTTCAACATGCTTAGAAGCATTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGGAGGATCTTGAATCGTGTTTCAATTGATCAAAGTGTGGTAGATCTTGACATTCCATTTAGACTTGGAGGGTTTGCTTCATCAACAATACAGCTTATTGGCATTGTTGCTGTAATGACAGATGTTACATGGCAAGTTTTGCTCCTTGTAGTCCCCATGGCTATTCTTTGTCTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTACGTATTGTGAGCATCCAGAAATCTCCAATTATACATCTTTTTGGTGAATCAATTGCGGGAGCAGCCACCATTAGAGGGTTTGGACAAGAAAAAAGGTTCATGAAGAGGAATCTCTATCTTCTGGATTGTTTTGCACGACCATTCTTCTGTAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTTTCAACCTTTGTATTTGCTTTCTGCCTGGTATTGCTTGTTAGCCTTCCCCATGGAAGTATTGATCCCAGCATGGCTGGACTTGCTGTAACGTATGGCCTGAATTTAAATGCACGTCTATCAAGGTGGATACTCAGTTTTTGCAAACTAGAAAATAAAATTATATCCATTGAAAGAATTTATCAGTACAGCCAAGTTCCTACTGAAGCGCCAGCAATTATTGAGGATTATCGCCCTCCATCCTCATGGCCAGAGAATGGGACAATCCAATTAATTGATCTGAAGGTACGTTACAAGGAAAATCTTCCTGTGGTGCTTCATGGAGTATCCTGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGTCGTACTGGCAGTGGCAAATCTACGTTGATTCAAGCACTATTTCGATTGGTTGAACCAGAAGCAGGGAGTATCTTCATAGACAACATTAACATTTCAGCTATTGGCCTTCATGACCTTAGAAGCCATTTGAGTATCATACCACAAGATCCAACCTTATTTGAAGGCACCATTCGAGGAAATCTCGATCCTCTTGAAGAGCACTCTGACAAAGAGATTTGGGAAGCCCTAGATAAGTCTCAACTTGGTGAGATCATCCGTGAAAAGGGGCGAAAGCTTGATATGCCAGTGCTGGAAAATGGAGATAATTGGAGTGTAGGACAGCGGCAACTTGTTTCTTTGGGTCGAGCTCTGCTGAAGCAATCAAAGATACTTGTACTTGATGAAGCAACTGCATCAGTCGATACTGCTACTGATAATCTTATACAGAAGATTATTAGAAGGGAGTTTAGAGATTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTGGTGCTGGTACTCAGTGATGGTCGAGTTGCAGAGTTTGACACTCCAACAAGGCTATTAGAGGACAAATCATCTATGTTTTTGAAGTTGGTGACTGAGTATTCATCACGGTCAAGTGGCATAGCAGACTTTTAA 4542 0.4337 MGVARFFHHVLGLSVLELATICVNLTFVLLFLFVVSVRRAIVYQGGLRFGKNGDSGNASPICSVIDEETRGVRIGLVFKLSVVSCFYVLIVHVLALGFEGGALVWGEADVDLSLLSVPAAQVLAWFVLSFSALHCKFKVSERFPVLLRVWWFLSFVICLCTLYVDGRGFWEDGFQHLCSRAVSNVAATPPLAFLFVVAVRGDTGIRVCRNSDLQEPLLVEEEPGCLRVTPYRDAGIFSLVTLSWLNPLLSVGAKRPLELKDIPLVAPRDRAKTSYKILNSNWERLKAENDNPSKQPSLAWAILKSFWKEAALNAIFAGLNTLVSYVGPYMISYFVDYLGGKETFPNEGYTLAGIFFVSKLVETVTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDFSWYLHDMWMLPLQIVLALFILYKNIGIASIATLIATIVSIVVTVPVARIQEDYQDKLMTAKDERMRKTSECLRNMRILKLQAWEDRYRLKLEEMRGVEYKWLRKALYSQAFITFIFWSSPIFVSVVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSTDRISTFLQDEELQEDATIIMPRDLSNMAVEIRDGVFCWDSSLPRPTLSGIHMKVEKGMSVAVCGMVGSGKSSFLSCILGEIPKLSGEVKVCGSVAYVPQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYVLTALANKTVIFVTHQVEFLPSADMILVLKEGHIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPNHSDDSDENVPLEESIMNSKTSISSAYDIDSLAKEVQEGSSDQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMMVYWSYMAAAYKGLLIPLIVMAQTLFQFLQIASNWWMAWANPQTEGDQPRVTPTVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVAVMTDVTWQVLLLVVPMAILCLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCLVLLVSLPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQVPTEAPAIIEDYRPPSSWPENGTIQLIDLKVRYKENLPVVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPEAGSIFIDNINISAIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIREKGRKLDMPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRREFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPTRLLEDKSSMFLKLVTEYSSRSSGIADF 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01231 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1259 1497 IPR027417 -
Viun7g01231 1513 Gene3D - 1250 1503 IPR027417 -
Viun7g01231 1513 Pfam ABC transporter transmembrane region 952 1194 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01231 1513 Pfam ABC transporter transmembrane region 314 579 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01231 1513 CDD ABCC_MRP_domain2 1265 1485 - -
Viun7g01231 1513 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Viun7g01231 1513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 950 1220 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01231 1513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun7g01231 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 847 IPR027417 -
Viun7g01231 1513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1267 1501 IPR003439 GO:0005524
Viun7g01231 1513 SMART AAA_5 1293 1478 IPR003593 GO:0016887
Viun7g01231 1513 SMART AAA_5 652 833 IPR003593 GO:0016887
Viun7g01231 1513 FunFam ABC transporter C family member 5 611 857 - -
Viun7g01231 1513 Coils Coil 905 925 - -
Viun7g01231 1513 FunFam ABC transporter C family member 10 294 607 - -
Viun7g01231 1513 Pfam ABC transporter 1284 1432 IPR003439 GO:0005524
Viun7g01231 1513 SUPERFAMILY ABC transporter transmembrane region 936 1247 IPR036640 GO:0005524|GO:0016020
Viun7g01231 1513 Pfam ABC transporter 643 777 IPR003439 GO:0005524
Viun7g01231 1513 Gene3D - 620 853 IPR027417 -
Viun7g01231 1513 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Viun7g01231 1513 CDD ABCC_MRP_domain1 625 824 - -
Viun7g01231 1513 SUPERFAMILY ABC transporter transmembrane region 300 610 IPR036640 GO:0005524|GO:0016020
Viun7g01231 1513 FunFam ABC transporter C family member 5 911 1248 - -
Viun7g01231 1513 CDD ABC_6TM_ABCC_D2 948 1242 IPR044726 GO:0140359
Viun7g01231 1513 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1504 - -
Viun7g01231 1513 MobiDBLite consensus disorder prediction 899 918 - -
Viun7g01231 1513 Gene3D ABC transporter type 1, transmembrane domain 279 608 IPR036640 GO:0005524|GO:0016020
Viun7g01231 1513 Gene3D ABC transporter type 1, transmembrane domain 909 1248 IPR036640 GO:0005524|GO:0016020
Viun7g01231 1513 FunFam ABC transporter C family member 3 1250 1502 - -
Viun7g01231 1513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 848 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01231 Viun-Chr7 14028010 14036597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01231 625 841 Calmodulin-binding Proteins AT2G36910 30.472 2.05e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01231 - - gmx:100781010 2778.43