Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01228 ATGGCGCTGTGGATGGAAAAGGGTTCGGAGCCCTTAACGGAAAGCGAGAAGGCTGACCTTGAAGCCATTGCTGCACTCAAAGAGTCTGCTGCATTTGAATTCAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTATTCTGATGCCATTGATTGTTACACAAGGGCAATTGATCAGAAAGCCTTGGGTGACTCTGAGACCTCTATTCTGTTTTCAAATAGAGCCCATGTGAATTTGCTACTAGGAAATCTTAGACGTGCTCTCGTAGATTCTCAAGAGGCCCTCAAGTTGTGCCCTTCAAATATAAAGGCAATTTATAGAGCTGTCAAAGCTTCCCTTTCGCTGAATATGTTGGCTGAAGCAAGAGAGTATTGTCTGAAGGGTCTTCAGTTGGACCCCAATAATGAGGATTTGAAGAAGCTTGACAGACAGATTGGTCTGAAGATATCAGAGAAGGAAAAGCATGAGGCTCAAGTCTCCAAGGCTGTTGCAGAGGCAAAAGAACTTGTGTCTGCTATAGAATATAGAGGCTTGAAGATTGGAAAGGCAATGTATCGAGACCTTATTGGATTGAGGAAACCTGTGTTGGATAAAAGTAATATCCTTCATTGGCCTGTTGTTCTTCTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGCGAGACTGACATGTTTTCGGCTCACCTTGATTTGATATTTTCAGAAGATCAGCCTTTGTCATGGGATGTTGAAAACAACTACAAACGTGAATTTATTGAATTATACTATGAGGCTGGTTCTGGACACTGTCTATCGAAGGAAAAACTTCTTTGTTGTCTATTAGAAGGAACTGCAGCTGCTCACAGTGATAGTGTTGGTGATGAAGAGAAAGATGCAGTTGAGGATTATAAGCAACAAACGGGTTCTCCAAAATGGATCAAAGTGAATGAAAGGAGGACACTCAATGATGTTCTGAAAGAGCCTGATTTCATCATTCCTGGGATCCCAGTCTTCTATGTTATTTCGAAGAGATCCAGCTTTTACAGCAAGTTCAAAGCTGGAAAGTGGGCTCCTCCAAATGTATGA 1083 0.4183 MALWMEKGSEPLTESEKADLEAIAALKESAAFEFKEKGNQYVKMGKKHYSDAIDCYTRAIDQKALGDSETSILFSNRAHVNLLLGNLRRALVDSQEALKLCPSNIKAIYRAVKASLSLNMLAEAREYCLKGLQLDPNNEDLKKLDRQIGLKISEKEKHEAQVSKAVAEAKELVSAIEYRGLKIGKAMYRDLIGLRKPVLDKSNILHWPVVLLYAEVMSSDFIEDFCETDMFSAHLDLIFSEDQPLSWDVENNYKREFIELYYEAGSGHCLSKEKLLCCLLEGTAAAHSDSVGDEEKDAVEDYKQQTGSPKWIKVNERRTLNDVLKEPDFIIPGIPVFYVISKRSSFYSKFKAGKWAPPNV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01228 360 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
Viun7g01228 360 SUPERFAMILY TPR-like 22 158 IPR011990 GO:0005515
Viun7g01228 360 CDD CTWD_Cns1-like 170 352 - -
Viun7g01228 360 Coils Coil 155 175 - -
Viun7g01228 360 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 357 - -
Viun7g01228 360 SMART tpr_5 71 104 IPR019734 GO:0005515
Viun7g01228 360 SMART tpr_5 31 66 IPR019734 GO:0005515
Viun7g01228 360 SMART tpr_5 105 138 IPR019734 GO:0005515
Viun7g01228 360 Pfam Cns1/TTC4 Wheel domain 201 268 IPR044059 GO:0051879
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01228 30 161 Calmodulin-binding Proteins AT3G25230 30.769 1.79e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01228 K24927 - gmx:100788789 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01228 7 13920924 13924786 Viun7g01228 7 13920924 13924786 ECH