Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01223 ATGATTTTGATGTCAACCTCCTTCATGTTCATCCTTGCTCTCCTCCATTTGATGCTTCTCTCTTTCCAAGTGGACTCAGTTTCTATGAATGTCCCATTTGCTTCATCTGAACGAGCTAAAATGTTGTTACTTAAACCTTCTAAGCAATCTCCGTCTCAAGGTCCTATTCTGACTCCAAGACCAAAACTTCCTCATTATGACCATCATCACCACAGTGGGAAACCTTATCCTGTGGTTCCATCCCCTTATAAAGACCCAGCATGTAGCCAAATCTGTACTGATCCATTCACTGCAACTCCTTTTGGTTCACCTTGTGGTTGTATATTTCCCATGAAAGTCAGACTAGTACTGGGTGTAGCCCCTATGGTTGTTTTTCCAGTCACTACTGAGTTAGAGATTGAAGTTGCATCTGGAACATATTTGAAGCAGAGCCAAGTGAGGATAATAGGTGTCAGTGCTGACAATCAAAATCAGTGGAGAACCATTGTTGATATTGACTTGGTTCCACTTGGGGAAAATTTTGAAAATACCACTGCACTTCTGTTGTATGAGAGGTTTTGCCACAAAAAAGTTCATCTAAATAGGAGCCTTTTTGGTGATTATTCAACATTGTACGTTGCTTATCCAGGTATTCCATCAGCACTGCCACCTGGATATCTAATTGGGAGTAGTCCCCTGCCCAGTGATACCGGTGGTTTTCTCCCAATCACCGCTTCCCTCATGCGTGAGCACGAGAAATTGACTCTTAAAACCATACTCATTATTTCTCTATGTTCTGCTGTACTCTTTTTAGTTTTGGTTGGAGCATTTTTCATTTTTTTGAAATGGTGGAAAATTAGGAGCTCATCAAGTGCTATCAGCTCTTCACTCACATCATATCTAAATAAGAGATCTGGCGTGGAATTTATATTGTCAGGCAGAATTATGAGCTCAAGATCTATGTCCCTTGTGTCCACTATTGCTGCTTCTATTCTCTCCGTTAAAACATTTTCCTTCTCTGAGCTTGAGAAAGCAACAGATAGATTCAGTTCTCAGAGAGTTTTGGGAGAAGGAGGATTTGGGCGTGTTTATTCTGGGACATTGGATGATGGAAATGAAGTTGCAGTTAAGCTGCTAACAAGGAATGATCAGAATAGAGACCGTGAATTTATTACAGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTTGTGAAACTCTTTGGTATATGCATAGAAGGGAGAAAGCGTTGCTTGGTTTATGAGTTTGTTTGCAATGGCAGTGTTGAGTCTCATTTGCATGGTGATGACAAGAAAAGCTGCCCTCTGGATTGGGAAGCACGGAAAAGAATTGCCATTGGATCTGCAAGAGGTTTGGCCTATCTACACGAGGATTCCAATCCTCGTGTAATTCACCGAGACTTTAAAGCTAGTAATGTGTTGTTAGAAGATGACTTTACCCCTAAGGTTTCTGATTTTGGATTAGCCAGAGAAGTGGGTGAAGGAAATGGTCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTATTGCTTGAGCTTATAACAGGCAGAAAATCAGTGGACATGTCTCAACCTGAAGGAGAGGAGAATCTTGTAACGTGGGCTCGACCACTGTTGAGATGCAGAGAAGGTTTAGAAAAGCTGGTGGATCCATTTTTGGCTGGAAAGTGTGACTTGGATGAGATGGCAAAGGTGGCTGCTATTGCTTCCATGTGCGTACACCCGGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAATTGATCTACAACGACGACACCAACGAGAGTGAGAAGGAGTCTTTGTGGCATGAATCGGATTTTGGAGGTGAGCTTGTGTTTTCTGATAGCAGTTGGTTGGATGGTGAATGGGTAGCCCCGAGATTAACTTATGGACCAGAATCTTCCCTCATCACTATGGAGTACAGTTCTGGTGTACTAGAAATGGAAAAGGGAACATCAAGCTTGAATGCAGGTGAGACATCTTTGCCAATCAGGCACGGGAATAGATCAGGCCCCTTGAGAACAGCCCGGGGCTTCCTGAAAGTTGTGTGA 2139 0.425 MILMSTSFMFILALLHLMLLSFQVDSVSMNVPFASSERAKMLLLKPSKQSPSQGPILTPRPKLPHYDHHHHSGKPYPVVPSPYKDPACSQICTDPFTATPFGSPCGCIFPMKVRLVLGVAPMVVFPVTTELEIEVASGTYLKQSQVRIIGVSADNQNQWRTIVDIDLVPLGENFENTTALLLYERFCHKKVHLNRSLFGDYSTLYVAYPGIPSALPPGYLIGSSPLPSDTGGFLPITASLMREHEKLTLKTILIISLCSAVLFLVLVGAFFIFLKWWKIRSSSSAISSSLTSYLNKRSGVEFILSGRIMSSRSMSLVSTIAASILSVKTFSFSELEKATDRFSSQRVLGEGGFGRVYSGTLDDGNEVAVKLLTRNDQNRDREFITEVEMLSRLHHRNLVKLFGICIEGRKRCLVYEFVCNGSVESHLHGDDKKSCPLDWEARKRIAIGSARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREVGEGNGHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELITGRKSVDMSQPEGEENLVTWARPLLRCREGLEKLVDPFLAGKCDLDEMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDDTNESEKESLWHESDFGGELVFSDSSWLDGEWVAPRLTYGPESSLITMEYSSGVLEMEKGTSSLNAGETSLPIRHGNRSGPLRTARGFLKVV 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01223 712 PANTHER OS01G0750732 PROTEIN 87 630 - -
Viun7g01223 712 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Viun7g01223 712 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Viun7g01223 712 FunFam receptor-like serine/threonine-protein kinase ALE2 315 417 - -
Viun7g01223 712 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01223 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Viun7g01223 712 SUPERFAMILY Protein kinase-like (PK-like) 322 616 IPR011009 -
Viun7g01223 712 Pfam Protein tyrosine and serine/threonine kinase 344 613 IPR001245 GO:0004672|GO:0006468
Viun7g01223 712 Gene3D Transferase(Phosphotransferase) domain 1 418 636 - -
Viun7g01223 712 FunFam Receptor-like serine/threonine-protein kinase ALE2 418 630 - -
Viun7g01223 712 MobiDBLite consensus disorder prediction 46 72 - -
Viun7g01223 712 CDD STKc_IRAK 348 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01223 Viun-Chr7 13850199 13857850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01223 89 630 Receptor kinase-like Gene Family AT5G56890 55.957 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun7g01223 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01223 - - gmx:100790546 994.186