Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01213 ATGCAGATGATGAAGAAGAAGAAATCAGATGTAGAAAGGCAGCAGGACGACTACAATGAATTTAAGAGCAATGCAGATAAAGATGATAGTCAAGACAAAAAGGAGGAGAGGAAGAAGAAAAAACTGAGTGAAGAAGGTAAAAGTAAGGAGTATAATGAATTTGAAAGAAATGAAGCTGAAGATGATGCCCTAAGTAAGAAGAGGAAGAAGAAAAAATTGAGTACAGAAAGCAAAAGTAAGGAGTATGAAGTCTTTGAAAAGAATGAAGGTGAAGGTGATGCCGAAGGTGAAGGTAAGGAGAGGAAGAAGAAAAAACTGAGTGAAGAAGACAAATGTAAGGAGTATAATGAGTTTGAAAACAATGAAGGTGAAGATGATGCCCTGGGTAGGAAGAGAAAGAAGAAAAAATTGAGTAAAGAAAGCAAAAGTAAGGAGTACAATGTCTTTGAAAGGAATGAAGGTGAAGTTGATGTCAAAGATAAGAAGAAGAAGAAGAAAAACAAACTGAGTGAAGAAGCCAAAAGTAAGGAGTATAATGAATTTGAAAGCAATGAAGTTGAAGACAATGCCCAAGGTAAGAAGAAAAAATTGATTCAAGAAAGCAAAAGTGAGGAGTATAATGTTTTTGAAAGGAATGGAGGTGAAAGCCATATCGAAGGTAAGAGGAAGAAGAAAAAGCTGAATAAAGAAGGCAAAAGTAAGGAGTATAATGAATTTGAAAACAATGATGGTGAAGATGATGCCCAAGGTAGGAAGGGGGAGAAGGAAAAATTGAGTAAAGCAAGCAAAGGTGAGGTGTATAATGTCTTTGAAAGGAATGAAGGTGAAGATGATGCCAAAGGTAAGAGGAAAAAGGAGAAGAAAAGAAAACATTGTGAAGAAAGCAAAACTGAGGAGTATAATGTCTTTGAAAGGAATGAAGGTGAAGATGATGCCAAAGGTAAGAAGAAGAAGAAGAAGAAAAGAAAACATGGTGAAGAAGGCAAAAGTAAGGAGTATAATGAGTTTGAAAACAATGAAGGTGAAGATGATGCCCAAGGTAAGAAGAGGAAGAAGAAAAAATTGAGTAAAGAAGGTGAAGATGATGTTGAAGGTAGGAAGAGTAAGAAAGGAAAAATGATTGAAGACGGCAAAAGCAAGGACAAAAATATGATGACAAAGAATAAAGCCAAGGCAGATAATGGCGACTCTCCTAATCCTGCAAACAGTGGATTATCCAAACCCAAACGGGTAACTTTTTCTGATGAAGTGGAGGTTTGTTGTGATGGTTTAGTTCGTGGGAAACGGTTCACACCAGAAGAAGATGAGCAGATTAAATCTGCTGTTTATAATTTTATAGAGTCTCGTGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCAGGGCTCATAGGGAAGTTAGATATTGTTGGAAGGAAATTGCAGCAGCCTTACCCCACAGGCCACTTTATAGTGTGTACACTCGTGCCCATATTTTGTTTGAAAGGAGTGAGAAGCGAGAGTGGACACCTGAAGAGTATGAATTTTTACGGAAGGTGAAGGAACAGCATGGATCTAATTGGAGACAAGTAGCGGATGCATTGGGCAAAAATCGAATTCATGTAAAGGATGCATGGCGCAGAGTGAAATTAAGTAATACAAATAAAGGACGATGGACCCAAGAGGAGTATCAAAAGTTATTTGATTTAGTGAACCTGGACCTACGTGTGAGGGCTTCACAGGGTTATAGAAAATCAAAACATGGTATGTTACGAGATAATATTGGTTGGGAGGCAATTGGTGAGAAGTTGGTCAGTAGAAACTCCGTGAGCTGCTGCCACAAGTGGTATGATAAATTAAGATCACCCATGGTTGCTGCTGGTGCATGGAGTGATACCGATGACTATCGCCTTGTTGATGCTTTATATAATTTGGATGCCTGCTGCATGGAGGAGGTGGATTGGGACCATCTGCTTGAGCATAGGACTGGTGAGGCATGTAGAAAACGGTGGAACCAAATTGTCCGATATATTGGAGACCATGGAGGGAAGTCATTTGCTGAGCAGGTTGAGATTCTTGCAAAAAGATATTGCCCCGACTTATTGGAAGTAAGAGAGGCATTTGATGCAAAACCTTTGGTTTGTTGA 2130 0.3892 MQMMKKKKSDVERQQDDYNEFKSNADKDDSQDKKEERKKKKLSEEGKSKEYNEFERNEAEDDALSKKRKKKKLSTESKSKEYEVFEKNEGEGDAEGEGKERKKKKLSEEDKCKEYNEFENNEGEDDALGRKRKKKKLSKESKSKEYNVFERNEGEVDVKDKKKKKKNKLSEEAKSKEYNEFESNEVEDNAQGKKKKLIQESKSEEYNVFERNGGESHIEGKRKKKKLNKEGKSKEYNEFENNDGEDDAQGRKGEKEKLSKASKGEVYNVFERNEGEDDAKGKRKKEKKRKHCEESKTEEYNVFERNEGEDDAKGKKKKKKKRKHGEEGKSKEYNEFENNEGEDDAQGKKRKKKKLSKEGEDDVEGRKSKKGKMIEDGKSKDKNMMTKNKAKADNGDSPNPANSGLSKPKRVTFSDEVEVCCDGLVRGKRFTPEEDEQIKSAVYNFIESRGLGDEGLDMVLHCRAHREVRYCWKEIAAALPHRPLYSVYTRAHILFERSEKREWTPEEYEFLRKVKEQHGSNWRQVADALGKNRIHVKDAWRRVKLSNTNKGRWTQEEYQKLFDLVNLDLRVRASQGYRKSKHGMLRDNIGWEAIGEKLVSRNSVSCCHKWYDKLRSPMVAAGAWSDTDDYRLVDALYNLDACCMEEVDWDHLLEHRTGEACRKRWNQIVRYIGDHGGKSFAEQVEILAKRYCPDLLEVREAFDAKPLVC 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01213 709 Coils Coil 338 358 - -
Viun7g01213 709 MobiDBLite consensus disorder prediction 230 283 - -
Viun7g01213 709 Coils Coil 222 242 - -
Viun7g01213 709 Gene3D - 504 542 - -
Viun7g01213 709 ProSiteProfiles Myb-like domain profile. 545 614 IPR001005 -
Viun7g01213 709 SUPERFAMILY Homeodomain-like 500 561 IPR009057 -
Viun7g01213 709 Gene3D - 543 619 - -
Viun7g01213 709 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 500 548 IPR017930 -
Viun7g01213 709 Coils Coil 159 179 - -
Viun7g01213 709 ProSiteProfiles Myb-like domain profile. 616 669 IPR001005 -
Viun7g01213 709 SUPERFAMILY Homeodomain-like 594 673 IPR009057 -
Viun7g01213 709 Coils Coil 4 24 - -
Viun7g01213 709 Coils Coil 56 76 - -
Viun7g01213 709 SMART sant 426 497 IPR001005 -
Viun7g01213 709 SMART sant 549 616 IPR001005 -
Viun7g01213 709 SMART sant 499 546 IPR001005 -
Viun7g01213 709 SMART sant 620 671 IPR001005 -
Viun7g01213 709 ProSiteProfiles Myb-like domain profile. 495 544 IPR001005 -
Viun7g01213 709 MobiDBLite consensus disorder prediction 291 314 - -
Viun7g01213 709 PANTHER GB|AAC33480.1 141 708 - -
Viun7g01213 709 MobiDBLite consensus disorder prediction 140 221 - -
Viun7g01213 709 Pfam Myb-like DNA-binding domain 503 561 - -
Viun7g01213 709 MobiDBLite consensus disorder prediction 1 409 - -
Viun7g01213 709 MobiDBLite consensus disorder prediction 390 409 - -
Viun7g01213 709 MobiDBLite consensus disorder prediction 326 389 - -
Viun7g01213 709 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01213 Viun-Chr7 13803581 13807338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01213 497 635 MYB Transcription Factor Family AT4G32730 30.282 1.85e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01213 - - var:108338141 1015.37