Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01188 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAGAAAGATTCCAAGCACTACCTACCAAATGTTGTAGCAAAACTAATGGGGCTTGAAACCCTTCCAAGGGGAGAGCCTAGTTTTTCTATGGAAAGAAGCTACAGAAGTGCTTATCCTCAACAAATGCATGGTCCTGTAGGCTTCCCATTCAGGCATTGGCAGCAGGAAGATAGGTTTATGGATAGGGAAATGCTTCATGAAGTTCACCCAAACACAGAACAGTTTGCTTACAGAGATATGTATGAAATATGGCAGCAATCTGAGAGAGCGAATCATGGAAGTGGCAAGGTACCTGATAGAGGAAGATGGAGTGAAGATGTTGATGGGAAAAGAATGGCTCTCATTCGTCAGAAATTCATAGAAGCAAAACATCTGTCAACCGATGAGAGAATGCGTCAATCTAAACAATTTAAAGATGCCTTGGAAGTTCTAAGCTCCAACAGTGATCTCTTAATGAGGTTACTGGATTCTCAAAATGTTTATGAATTTTACTCAAGTCCACGTACTGATACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGATGACAATGACAAACCAGCCAGAAAGGAGAAAAGGAACAATAGACTAACTAAGAAATCACCAAATGTTGATCAAGCATCTGGCTGGGAGAACAAGAATTCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCTCCAGTACGAACCACTCGAATTGTGTTGCTGAAACCTAGCCCTGGGAGGACACCTGATCAAAAGGATGCGGTTTCTCCAATAACAACATCATCACTAAATCTGAAAAGTGGTAATTGCCATCAGGGACCTGAATATGACGATGCAATAGAATCCATTAGAGTGGCAAAAGAGATGACACAGCAAATGCATAAGGGTCTGAGGAGCTATCAAAAGGATAAAACTCCACATTATTCTTCAGTGTTTTCCAATGGCTATTCTGATGATGAGAGTTCGTTCAACAAATCATATCACGAGTATGCATCAGCAAATTTCAGTGATTTGGAAGCTATGTCAATGTCACCGTTGCCAAGGCTTTCATGGGATTACAATTACATCAATGGCTGTAGCAGTCCTTATTCTACAATGTCCTTAGGTCGCATACCTTGCTCTCCTGAGTCATCAGTGTGCAGAGAGGCAAAGAAAAGACTTTCTGAAAGATGGACTATGATGGCATCAGATAATAAGGGTCCTCAAGAACAAATGAATGTGAGGAGAAACTCTACCTTGGGTGAGATGCTTTCTCTTACCCACATGAAGAAATCTGTAACATCTGTGGTTGAGAGTATTAAAGAGGACAAAGAACCCGGAAAATCTGTTTCTTGCAGTCATTCTTTCAATGCAGAAATAAGCATTGAGGGCTCTCCTAAAAATCTTCCCAGGTCAAATTCTGTGCCTGCATCCTCTACTGTCAATGAAACTGAGCTCACAGTTCAAGTTGCTGATCCAAAAACTGGCAAATCACAAGCCTCCAGGGCACAGATAAAGTCAAAGAAGAGATCAACGTTTAAAGAAAAAGTAGCCAGTCTCTTGTTCTCAAAGAGTAAGAAATCAATCAAGGAAAAGCCAAGTTCACCTCAATCTAAAGATGCATCCCAACCCGCTCCTATTGTCACTCAAGCATCAGTTCTTCCAGCATATGCACCTGAAGTCCTTAGGGATGATGAGTCTCAAATCATCAATGTGGATAGTTTTGAAGAGTTTTCTCTTGTAGCTCTATGTGAATCATCAGAGAAAACTTCCACAAATTCAGTTTCTAACAGACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGACAGTGGCAGGATCCATGATGCTAGAGATTAATTCAAGTGAAAGCCCAGATCAGCCTAGTCCATTCTCAGTATTACAACCTCCATTTGAAGATGATAACAATAATGTATCTCATGAGTCCTTGGACCGTATGAAGAATGATCAACCAGGATCACAGGTGGAACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTCTGCAGAAGTATTAAAACCCCTAATGGTTCCTTCCTTGGACTCCAAGGTAGAGGAAAAAGAGTGGCTTCTCTTGGTCCACAACCTACTATCAGCAGCTGGACTTGATGACCAGAAACAATATGACTCGTTTTACTCCAGATGGTATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATTATACATCAATCTAAATGAGAAAGAGTCTGAGCCAATGCATGAGGGCAGAAGAAGGAAGATGAGATCAAATCATAAACTTGTGTTTGATTATATCAATGCTGCACTATTGGAACTTGTTGGTTTTGGGTCAGAAAAGGGCCTAAAGGGCAGTGGAAAGCAGTGTAGGGTCCTAGTCCAAGAGAGTGCACCGGAATCTACCTTGTTGGTGGACCACATTGTGGCCAAAATAAAGGAATTAATGGCAAGTGGGGTGAGGTGTGAGTGGGACAGCAACAGCCTGGTAGTAGAAAATGTTGTCAGAAAAGAGATTGTGCAGATAGGGTGGGTTGAGCTTATGGAATTGGAGATAGAGGTTTTGGGAAAGGAGATAGAGGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTTACAAGCAGGGACTGA 2688 0.4141 MQMLIDKEMSKQKDSKHYLPNVVAKLMGLETLPRGEPSFSMERSYRSAYPQQMHGPVGFPFRHWQQEDRFMDREMLHEVHPNTEQFAYRDMYEIWQQSERANHGSGKVPDRGRWSEDVDGKRMALIRQKFIEAKHLSTDERMRQSKQFKDALEVLSSNSDLLMRLLDSQNVYEFYSSPRTDTKRITLIKPLKMDDNDKPARKEKRNNRLTKKSPNVDQASGWENKNSGNSPDSQKVDESPVRTTRIVLLKPSPGRTPDQKDAVSPITTSSLNLKSGNCHQGPEYDDAIESIRVAKEMTQQMHKGLRSYQKDKTPHYSSVFSNGYSDDESSFNKSYHEYASANFSDLEAMSMSPLPRLSWDYNYINGCSSPYSTMSLGRIPCSPESSVCREAKKRLSERWTMMASDNKGPQEQMNVRRNSTLGEMLSLTHMKKSVTSVVESIKEDKEPGKSVSCSHSFNAEISIEGSPKNLPRSNSVPASSTVNETELTVQVADPKTGKSQASRAQIKSKKRSTFKEKVASLLFSKSKKSIKEKPSSPQSKDASQPAPIVTQASVLPAYAPEVLRDDESQIINVDSFEEFSLVALCESSEKTSTNSVSNRQEEDMITLEPGLTVAGSMMLEINSSESPDQPSPFSVLQPPFEDDNNNVSHESLDRMKNDQPGSQVELKSNLIDKSPPIESIARTLSWDDSSAEVLKPLMVPSLDSKVEEKEWLLLVHNLLSAAGLDDQKQYDSFYSRWYSLESPLDPSLRDTLYINLNEKESEPMHEGRRRKMRSNHKLVFDYINAALLELVGFGSEKGLKGSGKQCRVLVQESAPESTLLVDHIVAKIKELMASGVRCEWDSNSLVVENVVRKEIVQIGWVELMELEIEVLGKEIEGDLIQELVENAVVDFTSRD 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01188 895 MobiDBLite consensus disorder prediction 186 280 - -
Viun7g01188 895 MobiDBLite consensus disorder prediction 212 237 - -
Viun7g01188 895 Pfam Protein of unknown function (DUF3741) 127 170 IPR022212 -
Viun7g01188 895 Pfam Domain of unknown function (DUF4378) 715 885 IPR025486 -
Viun7g01188 895 MobiDBLite consensus disorder prediction 261 277 - -
Viun7g01188 895 MobiDBLite consensus disorder prediction 527 547 - -
Viun7g01188 895 MobiDBLite consensus disorder prediction 622 661 - -
Viun7g01188 895 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 894 - -
Viun7g01188 895 MobiDBLite consensus disorder prediction 463 485 - -
Viun7g01188 895 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01188 Viun-Chr7 13570435 13575718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01188 1 892 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 36.710 1.71e-133 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01188 - - gmx:100787955 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01188 7 13570435 13575718 Viun7g01188 7 13570435 13575718 ECH
Viun1g02211 1 33172639 33177980 Viun7g01188 7 13570435 13575718 PCT