Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01154 ATGGCTGATTCCACTCCGACTGCAACTCCTTCAAACGACACCAAATCATGCTTTTTCCGACGAACGGTCACTTTATATGATTGGTGGTTGGTTAAAGCCAAAGACGACTTCCAAGGAAAGCGTTTAGCCATCGCTGGCGTCTCATCGAGAAAGGATGAGGCAATGCGCGTGTTTGTTTCTTCTCCCATTATCAAAAGATACGACGAGTTTTCTCTCGAGACTGTCGATGGGATATATGTCATAATTAGTGGCTTCATCAACGAGCAGCGCACTATTGAAAACGGTTTCAACCCTCAGGTTTTCAACCGATTTCTATTTGGCTTCCCTCCAGACTGGGAAAGCCATGCTCTAGATTTCTCCAGAAAGGAATCAATCACTGGCAATGATTTGGGTAGTGCTTTTCTTGATGATGTACCAGCTAGCTGTCCAGAAATTTTATCTAATGGTGCAGAAGAGTGCACTCGTACATCTTTGATATCGCCAGAGGAGGCACCGGGAGATCACGGAAAGCTATTCCCTGGATCTGATTGCAATGTGTCAAAGGGGATAGATGGGGTTAATCTTTTTTGTAGTGATGGTGGGAAAAGACGTAGTGCCAGGTTGCATGATATTAAAGCATGCCTGCAGAGGAAGCAGGCTGCTTCTGGAGGTATTTCAATGGCCTCTGAGAGTTGTGATGTAGAGGGATCGAGAAGTCCGACAACACCCATACAGTCACAAACAAGGAGTGAATATTCAGTCGATGATTGTGTGGAAAATTCTATTCCTACTTTTTTGGCATCACCGGAGAAGGTGCAGGGTGATCAGGAAAAGGCATTCCCTGAAAATGAATGCAATGTGTCAGAGGATGTGGATGGTGTTAATGTTGCTTGTAGTAGAGGTAGGGAAAGACGAAGTGCCAAGTTGCATGATGTTGAAGTATTCCAGCGGAAGAAACAGTCTGCTTCTGGATTGCCTCCGAAGAATCCAAATAATAAGAACCATACTTCAGTAGCGGCCTTGGATAATTGTAATGTAGTGGAACCGAAAAGTCCAGAAACACCTATTCAGTCACAATCATGGAGACAACTATGCACATCATCTGAACAGATAGTTACAAAATCTGCATCCATAATTTCTAGAACATTGTCACCAAAGACCGAAGGCTGTCATAAGAAAAAAGTGGGCAGGTCTAAGGGAACACTGAATAAATCTGCTTCTGCTGGGAAAAATTCGCGATTAAGAGATCGAAGTCAATTGACCAAGGGAAAAATTCGCACATCATCTGAACAGATAGTTACAAAATCTGCATCCATAATTTCTAGAACATTGTCACCAAAGACCGAAGGCTGTCATAAGAAAAAAGTGGGCAGGTCTAAGGGAACACTGAATAAATCTGCTTCTGCTGGGAAAAATTCGCGATTAAGAGATCGAAGTCAATTGACCAAGGGAAGTGGACAGAAAAAATCCACTGTTTCTCCTGAGTTATCGAGTTTCAGAACATCCAGATCTGGCAGGTTGCTTTTACCTCCCTTAGAATTTTGGCGCAATCAAATACCAATATATGACGCGGATCACGAGCTTAAAGAAATTAAGGATGGTGCCTCTCTGATATCACCTTGTAGGGTTTCTTCACCATCATCGAGCAGGTTGTTGAGCTTGGGTATCTGCTGTACTCAACCAGTTCTACTATCTAATCTGGTAGGACTTCGCACTGTAAAACAAAGGTTCTGCAAAGATTGCAACAACAATGAAAGTTGGTGTTATTGGTTGTAG 1755 0.4296 MADSTPTATPSNDTKSCFFRRTVTLYDWWLVKAKDDFQGKRLAIAGVSSRKDEAMRVFVSSPIIKRYDEFSLETVDGIYVIISGFINEQRTIENGFNPQVFNRFLFGFPPDWESHALDFSRKESITGNDLGSAFLDDVPASCPEILSNGAEECTRTSLISPEEAPGDHGKLFPGSDCNVSKGIDGVNLFCSDGGKRRSARLHDIKACLQRKQAASGGISMASESCDVEGSRSPTTPIQSQTRSEYSVDDCVENSIPTFLASPEKVQGDQEKAFPENECNVSEDVDGVNVACSRGRERRSAKLHDVEVFQRKKQSASGLPPKNPNNKNHTSVAALDNCNVVEPKSPETPIQSQSWRQLCTSSEQIVTKSASIISRTLSPKTEGCHKKKVGRSKGTLNKSASAGKNSRLRDRSQLTKGKIRTSSEQIVTKSASIISRTLSPKTEGCHKKKVGRSKGTLNKSASAGKNSRLRDRSQLTKGSGQKKSTVSPELSSFRTSRSGRLLLPPLEFWRNQIPIYDADHELKEIKDGASLISPCRVSSPSSSRLLSLGICCTQPVLLSNLVGLRTVKQRFCKDCNNNESWCYWL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01154 584 MobiDBLite consensus disorder prediction 315 329 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 221 245 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 417 438 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 306 329 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 393 407 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 477 491 - -
Viun7g01154 584 Pfam SANTA (SANT Associated) 23 114 IPR015216 -
Viun7g01154 584 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 3 527 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 376 491 - -
Viun7g01154 584 MobiDBLite consensus disorder prediction 454 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01154 Viun-Chr7 12991993 13003183 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun7g01154 SANTA 2.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01154 - - vun:114192171 1145.18