Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01144 ATGGGAGAAGAAGCGGTTTGTGTGCATGCATTAGATGAAGGAAGGAAGGAAAACAATGAGGAACCAAGGACGGAACTGAAACGTGACTACGACCAATGCGTTAGTGATACCGAACGTCACCTGTTTCCTCATAAGAAACAAGTTAAAGAAGTTTCGAACGATGAAGTGCGCTCTGAGGTTTCTAATCCCAACGTTTCCGCAGTAGAGCATGCGCTAACTTTTCAAGATATAAGTAGCCAACCAACTGAATCCACGGACGTTAACCATGCGGAGTGTGGGGAACTGACGTCTACTTGTTTGGAGAATTCAAGTTCTGATGAGACCTTGAGTGATGAAGCTGGTGATCAGAATATTACTGCTACTACTACAAATAATAATAATAATAACAACAACAACAATACTTCTCAGAGTGACAAGGACTCCAATAGTGCTGCAATGACATCCTGCGTTGTGATGGAAATTCCCAAGCATGCTAGTTCCTCTGGGATCAGGAAGATTACTTTTAAGTTTAGTAAAAAGAAAGAGGACTATGGTTACCAACCACCAGCTCCTGTGCACCGTTCTGCTCTTTACACTGATGGCAATCACATTGGTTTTCATGGGGTTGATGAATATTTGGCGAGGGATTATTGTAGTGGTGGGTTGGTAGAAAGCATGGGATATGCTCCTGATGGAGATTTGGAGTCGTACGCTCGCAATATGGAATTGAAAATGTCCAAGAAAGTAGTTCCCAACTGTTACCCTACAAATGTCAAAAAGCTTTTATCAACTGGCATCCTTGACGGAGCTATAGTGAAGTATATTTACAATCCTGGAAAGGTTGAGCTACATGGGATTATTGATGCTGGTGGATATTTGTGTGGCTGTTCAATGTGCAATTACTCTAGAATTCTTAGTGCCTATGAGTTTGAGCAGCATGCCGGGGCCAAGACTAGACATCCAAATAATCATATTTTCTTAGAAAATGGAAGACCGATATATAGTATTATACAGGAAATAAAAACGGCTCCACTCAGTATATTGGACGAGGTTATCAAGAATGTGGCTGGTTCCTCTGTCAATGAGGAGTCTTTCCAGGTTTGGAAAGAAAGTCTTCTACACAGCAACGGCAAGGTTCAGGCTTATAAAAATTCTAGCGCCAAACATGTTGGCATGTCTCATACAAACCTAAGTCAATCCGTAGATAGTACTAGCCACTTGTCATCTTTGCATGGACCAAGTCATTACGAGCAGCTCAAGTATACGAATCAGACAAATGACGAATGGAAACGTGTGATGAAAAAGTCAAGCTCCTATTCTTCTAATTCTGGTGTACTGCTGAAAAGAAGTGCTGATGGTTGCACAAAGAGAAGGGACAATGATTTACACAGGTTACTTTTTATGCCAAATGGGCTACCAGATGGTGCTGAGTTGGCTTATTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAGGGAAGCGGTATAGTCTGTGGTTGTTGTGATATTGAGATAAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGGCGTCAACCATATCGACACATATATACTTCCAATGGGTTAACGCTTCATGATATAGCCCTCTCATTGGCAAATGGTCAAAACCTTACCACGGGAGACAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGTAATGGATGCCCTAGGGCCTTTCATACAGCCTGCTTGGGTTTACAGTGTGTTCCAGACAGTGGTTGGCAATGTCTAAATTGTGGAGACAATGCTGGTAGTGGAAGAGAATCTTCTCTTGTGAGGCCAATCATGATCCGGTTGACACGAGTTGATAAAACACCAGATTTTGAAATGGGTGGATGTGTTGTTTGCAGGGAACATGATTTCAGTGTTGCAAAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGCTGCTTGCGGGACATTGGGCTATGTGAGTTGGAAGAGCTGCCCAAGGACAAGTGGTTTTGTTGCAGTGACTGCAATCGAATATATGTGGCTCTACAGAGTTCAGTTTCTGCTGGAGCAGACGTTATACCAGCTTCCTTGTCAGAACTAATAATCAGGAAGCATGAGGAGAAGGGACTATGTACCTATGGTTCCACAGATGATATTCAGTGGAGAATTTTAAGCGGAAAAAGCCGTTATCCAGAACATTTACCACTGCTTTCAAGAGCTGCTGCAATTTTCCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGTCGTGATCTGATTCCGGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGCATTGTTTTAATAGTGAATTCTGTTGTAGTATCTGCTGGGCTTCTGAGGATTTTTGGCCGTAATGTTGCTGAGCTTCCACTGGTGGCTACTAGCAGAGTACATCAAGGAAAAGGATATTTCCAAGTGTTGTTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTAAACGTAGAAAAGCTGGTGCTTCCTGCCGCAGGGGACGCAGAGTCAATTTGGACTAAGAAATTGGGCTTCCGAAAGATGAGTGAAGATCAGTTATCCAAACATCTGAGAGAGGTGCAGCTAACTCTCTTCAATAAAACTTCAATGCTGGAGAAGACAGTGCAGCAGACTATAGAATGA 2685 0.4253 MGEEAVCVHALDEGRKENNEEPRTELKRDYDQCVSDTERHLFPHKKQVKEVSNDEVRSEVSNPNVSAVEHALTFQDISSQPTESTDVNHAECGELTSTCLENSSSDETLSDEAGDQNITATTTNNNNNNNNNNTSQSDKDSNSAAMTSCVVMEIPKHASSSGIRKITFKFSKKKEDYGYQPPAPVHRSALYTDGNHIGFHGVDEYLARDYCSGGLVESMGYAPDGDLESYARNMELKMSKKVVPNCYPTNVKKLLSTGILDGAIVKYIYNPGKVELHGIIDAGGYLCGCSMCNYSRILSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDEVIKNVAGSSVNEESFQVWKESLLHSNGKVQAYKNSSAKHVGMSHTNLSQSVDSTSHLSSLHGPSHYEQLKYTNQTNDEWKRVMKKSSSYSSNSGVLLKRSADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGSGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHTACLGLQCVPDSGWQCLNCGDNAGSGRESSLVRPIMIRLTRVDKTPDFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCSDCNRIYVALQSSVSAGADVIPASLSELIIRKHEEKGLCTYGSTDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNVAELPLVATSRVHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKHLREVQLTLFNKTSMLEKTVQQTIE 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01144 894 Pfam Tify domain binding domain 278 332 IPR032308 -
Viun7g01144 894 Pfam Tify domain binding domain 483 532 IPR032308 -
Viun7g01144 894 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 773 865 IPR016181 -
Viun7g01144 894 FunFam PHD zinc finger protein 770 877 - -
Viun7g01144 894 ProSitePatterns Zinc finger PHD-type signature. 623 678 IPR019786 -
Viun7g01144 894 PANTHER AUTOIMMUNE REGULATOR 15 888 - -
Viun7g01144 894 SUPERFAMILY FYVE/PHD zinc finger 619 676 IPR011011 -
Viun7g01144 894 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 619 681 IPR013083 -
Viun7g01144 894 SUPERFAMILY FYVE/PHD zinc finger 545 590 IPR011011 -
Viun7g01144 894 ProSiteProfiles Zinc finger PHD-type profile. 547 592 IPR019787 -
Viun7g01144 894 MobiDBLite consensus disorder prediction 117 144 - -
Viun7g01144 894 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 537 609 IPR013083 -
Viun7g01144 894 Gene3D - 720 889 - -
Viun7g01144 894 FunFam PHD zinc finger protein 621 681 - -
Viun7g01144 894 CDD PHD1_AIRE 549 589 - -
Viun7g01144 894 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 537 615 - -
Viun7g01144 894 SMART PHD_3 622 679 IPR001965 -
Viun7g01144 894 SMART PHD_3 549 590 IPR001965 -
Viun7g01144 894 ProSitePatterns Zinc finger PHD-type signature. 550 589 IPR019786 -
Viun7g01144 894 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01144 Viun-Chr7 12767399 12778297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01144 1 889 PHD Transcription Factor Family AT3G53680 52.655 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01144 - - gmx:100808999 1593.56