Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun7g01127 | ATGGTAGTCATTCTGAAGAGACAGGGAGAAAAGGAATCACAAGAGATTAAGGATTTGGTGAAGAGTTTTACGCCACAGGAGTTCCAGTGCAAGACGTGTAACCGCAAATTCTCGTCGTTCCAAGCGCTCGGCGGCCACCGGGCCAGCCACAAAAAGCCCAAGTTGGAGGGAGATCTGAGTCAGGACCGGAAGCCCAAAACCCACGAGTGTTCCATTTGCGGGCGGGGATTCTCGTTGGGCCAGGCCCTGGGAGGGCACATGAGAAAACACAGGGATGCCGTGAACGAAGGGTTTTCTTCAGTTATCGCGGAAGCACCGCTTCTGAAACGTTCGAATAGCAGCAAGAGGGTGATGTGCTTGGAGTTGGATCTGAACCTAACGCCGTTGGAAAATGACTTGAAGTTGCTGTTCGGAAACAAGGCTCCTACGGTGCATCTTTCCTTGTAG | 447 | 0.5213 | MVVILKRQGEKESQEIKDLVKSFTPQEFQCKTCNRKFSSFQALGGHRASHKKPKLEGDLSQDRKPKTHECSICGRGFSLGQALGGHMRKHRDAVNEGFSSVIAEAPLLKRSNSSKRVMCLELDLNLTPLENDLKLLFGNKAPTVHLSL | 148 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun7g01127 | 148 | MobiDBLite | consensus disorder prediction | 49 | 65 | - | - | |
Viun7g01127 | 148 | SUPERFAMILY | beta-beta-alpha zinc fingers | 28 | 90 | IPR036236 | - | |
Viun7g01127 | 148 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 30 | 50 | IPR013087 | - | |
Viun7g01127 | 148 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 70 | 90 | IPR013087 | - | |
Viun7g01127 | 148 | Pfam | C2H2-type zinc finger | 68 | 92 | - | - | |
Viun7g01127 | 148 | Pfam | C2H2-type zinc finger | 28 | 53 | - | - | |
Viun7g01127 | 148 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 28 | 55 | IPR013087 | - | |
Viun7g01127 | 148 | MobiDBLite | consensus disorder prediction | 43 | 65 | - | - | |
Viun7g01127 | 148 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 68 | 90 | IPR013087 | - | |
Viun7g01127 | 148 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 24 | 132 | - | - | |
Viun7g01127 | 148 | FunFam | Zinc finger protein | 64 | 91 | - | - | |
Viun7g01127 | 148 | Gene3D | Classic Zinc Finger | 57 | 120 | - | - | |
Viun7g01127 | 148 | Gene3D | Classic Zinc Finger | 26 | 48 | - | - | |
Viun7g01127 | 148 | SMART | c2h2final6 | 28 | 50 | IPR013087 | - | |
Viun7g01127 | 148 | SMART | c2h2final6 | 68 | 90 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun7g01127 | Viun-Chr7 | 12443060 | 12443742 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun7g01127 | 20 | 138 | C2H2 Transcription Factor Family | AT2G37430 | 56.589 | 6.84e-42 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Viun7g01127 | zf-C2H2_6 | 4.2e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun7g01127 | - | - | vra:106771374 | 244.588 |