Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01095 ATGATGGTTAGATCCTGTTGGAAACCGATTGTTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGAAGCCATCTTTATGGGGAATTCTCAATGGCTGTAGTTCAGGCCAATAGTTCATTAGAGGATCGAGGTGAACTTGAATCTGGACCTTTGAGTTCCAACCCCTTGGGCCCTCAAGGGACTTTTATAGGTGTCTATGATGGCCATGGTGGAAGCGAGGCCTCACAGTTTGTCATTGACAATCTCTTCTGCAATCTCAAAAGGCTTGCAGCTGAACATCAAGGTATGTCAGAACATGTTATCAAAAGGGCATATGCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCTGAGATTGCATCTACGGGAACTTGTTGCTTGGTGGGGGTAATTTGCAATGGAATGATATATATTGCAAATTCTGGTGACTCCCGGGTGGTGTTAGGAAGAGTAGAGAGAGCAACAAGGGAAACAGAAGCTATACAATTATCTACAGAACACAATGTTAACCAAGAAACAGTGAGAGATGAACTTCGCTCAAAGCACCCTTTTGATTCACAAATCGTCGTATTGAGACAAAACGTTTGGCGTGTCAAAGGCCTCATTCAGGTTTCACGATCCATTGGGGACGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCAAAGTATAGACTCGCAGAAACATTCTTCAGGCCGATTCTTAGTTGTGAGCCATCAACATCATCCCACACACTCCACCCAGATGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTACCAACCAAGAGGCTGTGAACATAGTCAACAACAACCCACCAAACGGTATTGCCAGAAGACTTGTGAAAGCTGCACTCAGAGAAGCTGCTAAGAAGTGTGAAATGAGGCTTTCTGACCTCCAAAAGATTGAGCAAGGCATGAGGAGGCACATCCATGATGACATTACAGTTATTGTGGTGTTTCTTAACTCCAGAACTGAGAATACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGCCTCTGCCAATTCCTAG 1113 0.4438 MMVRSCWKPIVDGDEGDGSGRVDGLLWYKDLGSHLYGEFSMAVVQANSSLEDRGELESGPLSSNPLGPQGTFIGVYDGHGGSEASQFVIDNLFCNLKRLAAEHQGMSEHVIKRAYAATEESFLSLVKKQWLSKPEIASTGTCCLVGVICNGMIYIANSGDSRVVLGRVERATRETEAIQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSSHTLHPDDQFLIFASDGLWEHLTNQEAVNIVNNNPPNGIARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNSRTENTSLCGSPLSIKGGASANS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01095 370 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Viun7g01095 370 SMART PP2C_4 32 344 IPR001932 -
Viun7g01095 370 Gene3D - 29 354 IPR036457 -
Viun7g01095 370 Pfam Protein phosphatase 2C 57 315 IPR001932 -
Viun7g01095 370 ProSiteProfiles PPM-type phosphatase domain profile. 35 346 IPR001932 -
Viun7g01095 370 PANTHER PROTEIN PHOSPHATASE 36 344 IPR015655 GO:0004722|GO:0006470
Viun7g01095 370 SUPERFAMILY PP2C-like 64 348 IPR036457 -
Viun7g01095 370 Coils Coil 307 327 - -
Viun7g01095 370 CDD PP2Cc 36 346 IPR001932 -
Viun7g01095 370 FunFam Phosphatase 2C family protein 27 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01095 Viun-Chr7 11722141 11724642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01095 2 365 PP2C-type Phosphatase Gene Family AT3G12620 64.674 2.30e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01095 K01102 - gmx:100819870 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01095 7 11722141 11724642 Viun7g01095 7 11722141 11724642 ECH
Viun1g02298 1 33800280 33802641 Viun7g01095 7 11722141 11724642 PCT