Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01086 ATGGGGAGGAGAATTCGTGAGAAAGAGTGTGCGTTGCCGAGTAGAAATTCCAGTAGTAGCCATCATACTCACCCGGGACGAGTTTGGGGAATTCTTCATGTTATAAAGTACCATCATTGGCGACAGGTGAAGAGAAGGCTTACAACAAGAAGGCATGGTGGTGGAAGACCTGATGAAAGAGTTGAAAGGCCAGGAACTTCTGATGATTCTGGGCTTAACTCTATGCCAGACCATTGTATTCCATATACAGAGTTATCTAATGTTGAAGAAAAGCTGGAACAGTCCCCTTCTCCATCCAAAAGTTCTATCAAATCCCGATTTAGGTCGCTTATCAATGAAGATATATACAGAAGGAAAAGTCGACACAAGAGAAGCTCAACTTGCCCTGCAAAGACACTGCAACTACCTCATGCTGATTCCGTTCATAACTTGGAGGTTGACCCACTTAGTGAATTGTTACTAACTGTTGAGAACCCTGAACCAGTTCTAAGAACCTTTCAGAACCATCTTGCAGCTGGCACACTGGATGCATTATCACCAGTTTTCTCTGATAAACGAATTGCCAACTGTGACAAATGCGTAGATTGTGGTACAATGTTTTGTAGTGACACTTTGGAGCAAAGCAAGATTCATAATCATAAACACTTGAGTTCTCCCATTCAAGATGGCCCGGAAGAGAAGTCGTTTAATGCCCAGATACTCACAACTGATGCTTCACCCCACCTCTTCAAGGACTTTCTTGATGCATTGGATGTGATAAACGCAAACAAGAACTTTCTATTAGAATACATACAGGATCCAGGTTCTCCTCTGCCATTTCACACTCACCATCAACAATCTTTGAAAGCTAATGTGAGACGAGCCAGGTCTCTTTCGTTTCCTGTATCTGCCTCATCATCTGGAAAGCAAGATTCTGATCCAGGTCAACTCATAGACCAAATGATAGATGATCTGTTAATTGCAGAAAAAAAGAACTTACAAACTCAGAGAAGCATGCCAAATGAATCCACACGTTACCGTTTAGAAGATTCTCACAAACAGTTCATACCATGTGGTTCTTCGCATAATTTCGAACAAGTAGGTGAAAGAGATCTTAAATCGACACCAGTTTCATCCCGGGTTCCACACAATGTGAGAACTAGCCACTTCAGGGATCTTAGAAAGAAGATGAAGCGCTTAATTGAAGAGGGAAGAAACGAAAAGCGTCGCATTACCATGGATGCCATACTTGACAAAATTCCTCGGGGAAAGAGACTTACAAAAAATATGAAGAAGTTGATTCATGACAAGTCCAAAGACCCCACAGTCAATGGGGAAGGTGAAGAAAGTTCCACAAGTGGTTTTGAGAACCGTCTCTCTTCTATGTCCTTCAACAAGCGTCAACGACCACCCATGAGGAATTCTTCTCTAAAAGAATCAATTGGAAGATATTCGCAGTTGTACGATACTTGTTTTAATAGTGAAGCCAAGTATCCTAGAGTTGAAAGCTCAAGAGTGAAAGAAGAAGAGAAAAATTCTACATTAAAGACGCCAAAATCCTTCAAAAGGTTTCTTTCAATGCCTAATTTGAAATCTTACTTTCACCACAATGATGAGTCTTCTTTCCTTTTATCTCCCAAAAACTCAATGAAGGTGCATGGAGATAGAAACATAAGTGCAAATGACATTGAACATGACCATAAGAGGTTTAACCATAGCGAGGACTCAAAAAGTCAAATTTTTCCACCTACACTGGTTAATAACACAAATCAAGAAATCAGCTTGAATGCTGACCAAAAACAACTGCTTGTCAGGAGTGCTTCAAAATCAGGAATAAATTTTAGTGCTGAGGAAAAGGAAACGAACATGGGAATTGAATGTTTAGAAAACTTGAGAGACCGTGGTCAAGACATTGGAGCTGAAGTAGATACTTACCCCGCGGAAGCAAACTCAGCCTTCTCTTCTGATACCAGCTTTCTTGACGTTTCATTTGATCTAGAGAACATAGACATTCCAGAAGGTTATACAGAAGAAGTAAACTCAGAAATAAAGCAAGGGCAAGACGATGGATCGGATCATATGTCAGAGCAGCAAGAGGCTGAAGAAAATCACCCGGAGGAGGGTGAGAATTTTCAGAACATTGGAACTCTAAACCAGAGCTTGAACTATGAATTTCCATGTATTGAAATTGATCCAAGTAATGTAGCAGCATTTAATTATGTGACAAAGGTTTTAGACCTCTCAGGGTTCACTGACCAGGATTCCCTAGGGATATGGTATTCTGATAACCAACCAGTTGGTCCTGCAGTATATGAAGAATTAGAGGGTTGCTTGCTTCTTGATCCTCATTGTTCTGGTAACAGTGGCGAAGGTGGAGAATGTAACCACATGCTTCTGTTTGATATAGTAAATGAAGGGTTGTTGGAGATTTTTGGAAGATCTTACAACTATTATCCAAGACCCTTGTCTACTCTCTCCCATGTTCATCCACTGCCAACAGGAGATAATGTGCTCTATGATGTGTGGAAGCTTATTAGCTGGTATCTGAACTCAACAATATCTGATAGTTACATATCATTGGATTATTATGTCAGCAAAGATCTGTCAAAATATGATGGGTGGATGAATCTTCAATTTGATTCTGAATGTGTGGGGCTTGAGATAGATGACTTGATTTTTGATGATCTTTTGGAGGAAATAATATTCACCCAGTTGACCTAA 2700 0.4026 MGRRIREKECALPSRNSSSSHHTHPGRVWGILHVIKYHHWRQVKRRLTTRRHGGGRPDERVERPGTSDDSGLNSMPDHCIPYTELSNVEEKLEQSPSPSKSSIKSRFRSLINEDIYRRKSRHKRSSTCPAKTLQLPHADSVHNLEVDPLSELLLTVENPEPVLRTFQNHLAAGTLDALSPVFSDKRIANCDKCVDCGTMFCSDTLEQSKIHNHKHLSSPIQDGPEEKSFNAQILTTDASPHLFKDFLDALDVINANKNFLLEYIQDPGSPLPFHTHHQQSLKANVRRARSLSFPVSASSSGKQDSDPGQLIDQMIDDLLIAEKKNLQTQRSMPNESTRYRLEDSHKQFIPCGSSHNFEQVGERDLKSTPVSSRVPHNVRTSHFRDLRKKMKRLIEEGRNEKRRITMDAILDKIPRGKRLTKNMKKLIHDKSKDPTVNGEGEESSTSGFENRLSSMSFNKRQRPPMRNSSLKESIGRYSQLYDTCFNSEAKYPRVESSRVKEEEKNSTLKTPKSFKRFLSMPNLKSYFHHNDESSFLLSPKNSMKVHGDRNISANDIEHDHKRFNHSEDSKSQIFPPTLVNNTNQEISLNADQKQLLVRSASKSGINFSAEEKETNMGIECLENLRDRGQDIGAEVDTYPAEANSAFSSDTSFLDVSFDLENIDIPEGYTEEVNSEIKQGQDDGSDHMSEQQEAEENHPEEGENFQNIGTLNQSLNYEFPCIEIDPSNVAAFNYVTKVLDLSGFTDQDSLGIWYSDNQPVGPAVYEELEGCLLLDPHCSGNSGEGGECNHMLLFDIVNEGLLEIFGRSYNYYPRPLSTLSHVHPLPTGDNVLYDVWKLISWYLNSTISDSYISLDYYVSKDLSKYDGWMNLQFDSECVGLEIDDLIFDDLLEEIIFTQLT 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01086 899 MobiDBLite consensus disorder prediction 46 80 - -
Viun7g01086 899 MobiDBLite consensus disorder prediction 675 705 - -
Viun7g01086 899 MobiDBLite consensus disorder prediction 428 473 - -
Viun7g01086 899 Coils Coil 383 403 - -
Viun7g01086 899 MobiDBLite consensus disorder prediction 675 701 - -
Viun7g01086 899 PANTHER PROTEIN TRM32 1 896 IPR044257 -
Viun7g01086 899 Pfam Protein of unknown function (DUF3741) 226 269 IPR022212 -
Viun7g01086 899 Pfam Domain of unknown function (DUF4378) 731 892 IPR025486 -
Viun7g01086 899 MobiDBLite consensus disorder prediction 1 25 - -
Viun7g01086 899 MobiDBLite consensus disorder prediction 52 66 - -
Viun7g01086 899 MobiDBLite consensus disorder prediction 438 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01086 Viun-Chr7 11478461 11485692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01086 709 886 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 50.000 1.64e-54 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01086 - - var:108319201 1372.45