Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01080 ATGGCTGACGACTTCGAATTCGCTGACAAAGTCCCTCCATCCTTCGATAGCGTGGGAAATGCTTCAAAAGGGTTCAACCCAGGATTAATTGTTCTCCTGCTCGTTGGTGGGTTGGTGTTGATATTCTTGGTTGGAAATTTTGTACTCTATAGCTATGCACAGAAGACCCTCCCTCCAAGAAAAAAAAAGCCAGTTTCAAAGAAGAAGATGAAGAAGGAGAGACTGAAACAGGGCGTCTCTGCACCTGGAGAGTAG 255 0.4549 MADDFEFADKVPPSFDSVGNASKGFNPGLIVLLLVGGLVLIFLVGNFVLYSYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01080 84 PANTHER DNA-BINDING PROTEIN S1FA2 1 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Viun7g01080 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Viun7g01080 84 MobiDBLite consensus disorder prediction 60 74 - -
Viun7g01080 84 MobiDBLite consensus disorder prediction 59 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01080 Viun-Chr7 11348441 11350924 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Viun7g01080 S1FA 7.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01080 - - gmx:100499820 123.25