Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01074 ATGGGGAGGAAGGGAAGTTGGTTTTCTACTGTGAAGAAAGCTCTAAGCCCTGAATCAAAGGAGAGGAACGATCAGAAAACAAGCAGACCAAAGAAGAAATGGTTTGGAAAACAAAAGTTGCAGACTTCAGCATCTCAATCTGAAACGGATAAAGCAGCACCTCCTCTTCCTCCACCTGAGGTTATTTTACCTCACTCTGAGATTGAAACAAGTCATGATCGCGTCAAAGTTGCAACTGCAGTGGTTGTGGAGGAACCGGTTCCTGCTGTTCATACAGAACCTGTTCCTGCTGTTCAGACAGAACCTGTGGAGGTCCAAGCCACTACAATTGTTCAGTTACACAGTAAACCAACAGAGGGAGTGGCAGCAATAAGGATTCAGAAAGCTTTTCGGGGATACTTGGCACGAAGGGCACTGCGGGCTCTGAGGGGACTGGTGAGGTTGAGATCCCTCATGGAAGGGCCAGTGGTGAAACGACAAGCCATTAGTACCCTCCGTTCCATGCAGACTTTTGCACATTTGCAAACTCAGATTCGTTCTAGGAGGCTCAGGATGTTGGAGGAGAATCAAGCTCTGCAGAAACAGCTCTTACAGAAACATGCAAAAGAGCTAGAGAGCATGAAGCTTGGTGAGGAATGGGATGACAGTGTACAATCGAAAGAACAGGTTGAAGCCAAGTTACTGAGCAAGTATGAAGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCACCAGCAAAACTGGAAGAGTTCATCAAGATCCATAAACCCAATGTTCATGGATCCAACCAATCCAACCTGGGGTTGGAGTTGGTTGGAACGATGGACGGCAGCCCGGCCCGGGGAGAGCCATAGCTTGGGGGAGAAAGAAAAGAATGACAATAAATCTATTAGAAGTTCTGGGCGTGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTAAATTTCAGCTGAATTCTGAGAAGCATTCTCCAACAGCGAGCCAAAATCCAGGCTCACCTAACTTTGAGTCACAATCCCAGCAATCGCATTCAAATCCTCCCAAGTCAGCTCCTCCAGCAGCTGCTAAGAAGGTGAAGAAAGTGAGTCCAAAGGACATGTTGGCCATAGATGATGACACTAAAAGTGTGTTGAGTGTGCAGTCAGAGCGGCCAAGGAGGCACTCCATTGGTGGATCAACTGTAGGAGATGATGAAAGCCTTGCAAGCTCCCCAGCAATCCCAAGTTACATGGTGCCAACTAAATCTGCCAAAGCCAAGTCCAGAATGCAAAGTCCACTAGCTGCAGAAAATGTGACCCCAGATAAAGGGTCAGGGTCCCCTGCTGGGACTGCAAAGAAGCGTCTCAGTTTCCCTGCTTCACCTGCTAGACCAAGAAGGCATTCAGGTCCACCAAAGGTTGAAAGCAGCTTCAATGCTGAAATCACTGTGGGAAATGGTGTGTCTGGTTGA 1461 0.4743 MGRKGSWFSTVKKALSPESKERNDQKTSRPKKKWFGKQKLQTSASQSETDKAAPPLPPPEVILPHSEIETSHDRVKVATAVVVEEPVPAVHTEPVPAVQTEPVEVQATTIVQLHSKPTEGVAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEENQALQKQLLQKHAKELESMKLGEEWDDSVQSKEQVEAKLLSKYEAAMRRERAMAYSFSHQQNWKSSSRSINPMFMDPTNPTWGWSWLERWTAARPGESHSLGEKEKNDNKSIRSSGRGITSAEISKSFAKFQLNSEKHSPTASQNPGSPNFESQSQQSHSNPPKSAPPAAAKKVKKVSPKDMLAIDDDTKSVLSVQSERPRRHSIGGSTVGDDESLASSPAIPSYMVPTKSAKAKSRMQSPLAAENVTPDKGSGSPAGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVSG 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01074 486 MobiDBLite consensus disorder prediction 283 307 - -
Viun7g01074 486 PANTHER IQ-DOMAIN 5-RELATED 1 467 - -
Viun7g01074 486 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Viun7g01074 486 MobiDBLite consensus disorder prediction 15 31 - -
Viun7g01074 486 MobiDBLite consensus disorder prediction 321 352 - -
Viun7g01074 486 MobiDBLite consensus disorder prediction 286 300 - -
Viun7g01074 486 MobiDBLite consensus disorder prediction 362 385 - -
Viun7g01074 486 MobiDBLite consensus disorder prediction 321 486 - -
Viun7g01074 486 SMART iq_5 118 140 IPR000048 GO:0005515
Viun7g01074 486 MobiDBLite consensus disorder prediction 1 60 - -
Viun7g01074 486 Coils Coil 485 486 - -
Viun7g01074 486 ProSiteProfiles IQ motif profile. 122 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01074 Viun-Chr7 11241193 11245299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01074 1 483 IQD Protein Family AT5G03040 50.408 4.34e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01074 - - vun:114191598 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01074 7 11241193 11245299 Viun7g01074 7 11241193 11245299 ECH
Viun1g02333 1 33960844 33965083 Viun7g01074 7 11241193 11245299 PCT