Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01042 ATGGAGAATAGGGTACCCTTCTTCATCTTCCTCTCCTCTTACTCATTCATGCTGCTAATTATCTTGCACCTTTCTTCTGCTCAGATGCCAGGTTTTGTGAGTCTGGACTGTGGTGGAAAAGAAAATTTCACTGACGAAATTGGTCTTACATGGACTCCTGATGAACTTAGGTATGGGGAAATAAGCACTATATCAGTTGCAAATGAGACAAGGAAGCAATACACAACAGTACGACATTTTCCTGCTGATTCTAGAAAATACTGCTACTCACTTGATGTTGTTAGTAGGACAAGGTACTTACTGAGGGCATCGTTCTTGTACGGGAACTTCGATGCAAACAATGTTTATCCAAAATTTGACATTTTCATTGGTGCTACTCATTGGTCGACTATAGTTATATCTGATGCTAACACCATAGAAATGAGAGAGCTCATATTTCTGGCTTTAAGTCCGACAGTTAGTGTATGTTTATCAAATGCAACAACAGGAAAGCCATTCATATCTACTCTTGAACTCCGGCAATTCAATGGTTCAGTTTATTATACATACACCGAGGAACACTTTTACCTCAGTGTCTCAGCAAGGATAAATTTTGGCGCAGATAGTGATGCTCCAATCAGGTACCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTATCAAGAGAGCGAACTATCTTGTTGATGTTGCAGCCGGAACTAGGAAAATTTCCACCAACAAATCAATTGAAGTTAGCAGTGATGAAATGCCACCAATGAAAGTAATGCAGAGTGCTGTGGTGGGCACAAACGGTTCTCTAACTTACAGGTTGAACTTGGATGGTTTTCCTGGTTTTGCATGGGCAATGACATATTTCGCAGAGATTGAAAATTTGGCTGAAAACGAATCCAGAAAATTCAGGCTAGTTCTTCCTGGTCATCCTGAAATTAGTAAGGCTGTGGTAAACATTGAAGAAAATGCTCCAGGAAAATATCGCCTCTATGAACCAGGATTTACCAATTTATCATTACCCTTTGTTTTGTCCTTTAAATTTGCCAAAACATCTGATTCTTCCAGGGGCCCTCTTCTAAATGCCATGGAGATTAATGAGTATTTGGAGAAAAATGATGGCTCTCCTGATGGAGAAGTTATATCTAGTGTACTTTCACACTACTCCTCAGAAGAATGGGCACAAGAAGGGGGTGATCCTTGTCTACCTGTTCCATGGACATGGGTCCGCTGTAGCTCAGATCAACAGCCAAAAGTAGTTTCAATTTTATTGTCCAGTAAAAACTTGACAGGCAATATTCCTTTGGACATAACCAAACTCACTGGTCTGGTTGAACTATGGCTTGATGATAACATGTTGACTGGCCCAATACCAGATTTCACAGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGACAGGTTCGCTCCCAACATCTTTGGTGAACCTTCCAAACTTGAGGGAATTGTATGTCCAAAATAATATGTTATCTGGAACTGTACCATCCGATCTTCTGAAGAAAGTTTCTTTTTTAAACTACTCTGGAAACGCTAATCTTCGTAAAGATAGCAGAAAAAAGACGCCCTTGTATGTGATTATTGGTTCAACAGTAGGAGCTGTTGTTCTGCTTTTGGCCACTATTATATCATGCTTGTTTTTTAAGCATAAAGGAAAAAGCAGATATTACGAACAAAATAGCCTTGTTTCCCACCCTTCTCAAAGTATGGAGTCTACTAAAAGCATTGGTCCTGCAGAAGCTGCACATTGCTACAGCTTTCCTGAAATCGAAAAATCTACAAATAATTTTGAGAAAAAAATTGGTTCTGGTGGTTTTGGAGTTGTTTACTACGGAAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGTAATTCCTACCAGGGCAAACGAGAGTTCTCCAATGAGGTGACTCTTCTCTCAAGAATACATCACAGAAACTTGGTACAGCTTCTTGGCTATTGTCGAGAAGAAGGAAATAGCATGCTCATTTATGAGTTCATGCATAATGGAACTCTGAAGGAACATCTTTACGCTCCATTAACGCACGGACGAAGTATCGATTGGAAGAAGCGCCTCGAGATTGCAGAAGACGCTGCAAAAGGAATTGAGTATCTTCACACAGGGTGTGTTCCTGCAGTCATCCACAGAGACTTAAAAAGCAGCAACATTCTCCTTGACCGACAAATGAAAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCTGTGGATGGGGCCTCCCATGTTTCTAGCATAGTTCGAGGAACAGTAGGATATTTGGATCCTGAGTACTACATTTCTCAGCAGCTTACTGACAAGAGTGATATTTATAGTTTTGGCGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCAGAAACATAGTGCAATGGGCAAAAATACACATCGAGAGTGGAGACATACAAGGTATCATTGATCCGGTGCTGCAGAACAAGTATGACCTGCAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCACATGGACACATGCGGCCATCAATTTCAGAAGTTCTGAAAGAGATACAAGATGCCATTGCTATTGAAAGAGGCGCCGAAGGAAATTCAGATGAGCCAAGAAATTCGGTTCATTCTTCAGTCAACATGGATTTGGCTGCTCCTGACAGCTTCCTCTCAATTGATGATTCCATTGCACAACAACAACCTACTGCACGATAG 2775 0.4036 MENRVPFFIFLSSYSFMLLIILHLSSAQMPGFVSLDCGGKENFTDEIGLTWTPDELRYGEISTISVANETRKQYTTVRHFPADSRKYCYSLDVVSRTRYLLRASFLYGNFDANNVYPKFDIFIGATHWSTIVISDANTIEMRELIFLALSPTVSVCLSNATTGKPFISTLELRQFNGSVYYTYTEEHFYLSVSARINFGADSDAPIRYPDDPFDRIWESDSIKRANYLVDVAAGTRKISTNKSIEVSSDEMPPMKVMQSAVVGTNGSLTYRLNLDGFPGFAWAMTYFAEIENLAENESRKFRLVLPGHPEISKAVVNIEENAPGKYRLYEPGFTNLSLPFVLSFKFAKTSDSSRGPLLNAMEINEYLEKNDGSPDGEVISSVLSHYSSEEWAQEGGDPCLPVPWTWVRCSSDQQPKVVSILLSSKNLTGNIPLDITKLTGLVELWLDDNMLTGPIPDFTGCMDLKIIHLENNQLTGSLPTSLVNLPNLRELYVQNNMLSGTVPSDLLKKVSFLNYSGNANLRKDSRKKTPLYVIIGSTVGAVVLLLATIISCLFFKHKGKSRYYEQNSLVSHPSQSMESTKSIGPAEAAHCYSFPEIEKSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYAPLTHGRSIDWKKRLEIAEDAAKGIEYLHTGCVPAVIHRDLKSSNILLDRQMKAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKIHIESGDIQGIIDPVLQNKYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIERGAEGNSDEPRNSVHSSVNMDLAAPDSFLSIDDSIAQQQPTAR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01042 924 Gene3D Transferase(Phosphotransferase) domain 1 678 897 - -
Viun7g01042 924 FunFam Leucine-rich repeat protein kinase family protein 376 529 - -
Viun7g01042 924 SMART serkin_6 602 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01042 924 SUPERFAMILY L domain-like 402 520 - -
Viun7g01042 924 CDD STKc_IRAK 608 875 - -
Viun7g01042 924 FunFam Leucine-rich repeat receptor-like protein kinase 576 677 - -
Viun7g01042 924 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Viun7g01042 924 Gene3D Phosphorylase Kinase; domain 1 575 677 - -
Viun7g01042 924 SUPERFAMILY Protein kinase-like (PK-like) 582 872 IPR011009 -
Viun7g01042 924 Pfam Protein tyrosine and serine/threonine kinase 604 804 IPR001245 GO:0004672|GO:0006468
Viun7g01042 924 ProSiteProfiles Protein kinase domain profile. 602 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g01042 924 Pfam Malectin-like domain 35 363 IPR024788 -
Viun7g01042 924 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 678 886 - -
Viun7g01042 924 Gene3D Ribonuclease Inhibitor 378 529 IPR032675 -
Viun7g01042 924 PANTHER OS07G0107800 PROTEIN-RELATED 464 878 - -
Viun7g01042 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01042 Viun-Chr7 10952615 10958025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01042 25 712 Receptor kinase-like Gene Family AT2G37050 68.345 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun7g01042 Malectin_like 5.3e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01042 - - gmx:100798007 1687.16