Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01036 ATGCCGCCGAAGCAACAATCCAAAGCTGATTTAGCGAAGAAGCAGAAGATTGTAGAGGACAAAACCTTCGGTCTCAAGAACAAAAACAAGAGCAAAAATGTTCAGAAGTATGTCCAGAACCTTAAGCAATCAGTGCAGCCCCGGGTCGATCCCGCCAAAGTCGATGCCAAGAAAAAGAAGGAGGAAGAGAAGGCCAAGGAGAAGGAGCTAAATGATTTGTTCAAAATCGCTGTTACTCAGCCTAAAGTGCCAGTTGGTGTTGATCCCAAGTCTATAGTGTGTGAGTTTTATAAAGTGGGGCAATGTGCCAAAGGCTTCAAGTGCAAGTTTTCGCATGATTTGAACGTTCAGAGAAAAGGGGAAAAAATTGACATTTACAGCGATAAACGTGACCAGGAAACAATGGAGGACTGGGATCAAGAGACCTTGGAGAAAGTGGTGGAGCAGAAGAAATCTGATTATAATCAGAATAAAGCGACTGACATTGTATGCAAATACTTTTTGGATGCGGTAGAAAAGAAGCAATACGGTTGGTTTTGGGAATGCCCCAATGGTGGTAAGAATTGCCATTATAGACATGCTCTTCCACCTGGTTATGTTTTGAAATCCCAAATGAAGGCTTTGTTAGAGGAAGAAGCTGACAAATTATCAATCGAGGAGGAGATTGAAAATCAGCGTGCCAAAGTGAAAACCACGACTCCTATGACTCCTGACTTATTCTATGAATGGAAGAAGAAGAAGATAGAAGAAAGAGATGCCAATTTAGCTGCACAGCAGGCAGAGAGGGCTAAGAATGACCGTATGAGTGGTCGGGAGCTATTTCTGTCAAATGCTAGCTTGTTTGTGGACGATGCAGAAGCCTATGAAAAATACCAGAGAGAACCAGAATATGATGAAACTGAAAAGAATGGTAATGGGAAGCCTACCCAAGATGGTCCCAGCACCTCAGCTGGTGCTGATGATGAAGCTCTTGATGACATAGATGACGATGACGATGAGTTGGACTTGGATGAGTTAAATGAATTGGAAGCAAGTTTAGCCAAGACATCAATCCAAATAAAGGAAACGGGAGCTGAAGCTTAA 1083 0.4266 MPPKQQSKADLAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPRVDPAKVDAKKKKEEEKAKEKELNDLFKIAVTQPKVPVGVDPKSIVCEFYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDQETMEDWDQETLEKVVEQKKSDYNQNKATDIVCKYFLDAVEKKQYGWFWECPNGGKNCHYRHALPPGYVLKSQMKALLEEEADKLSIEEEIENQRAKVKTTTPMTPDLFYEWKKKKIEERDANLAAQQAERAKNDRMSGRELFLSNASLFVDDAEAYEKYQREPEYDETEKNGNGKPTQDGPSTSAGADDEALDDIDDDDDELDLDELNELEASLAKTSIQIKETGAEA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01036 360 Coils Coil 246 266 - -
Viun7g01036 360 Coils Coil 53 73 - -
Viun7g01036 360 Gene3D - 87 203 - -
Viun7g01036 360 Coils Coil 206 228 - -
Viun7g01036 360 MobiDBLite consensus disorder prediction 291 360 - -
Viun7g01036 360 Coils Coil 339 359 - -
Viun7g01036 360 MobiDBLite consensus disorder prediction 321 340 - -
Viun7g01036 360 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Viun7g01036 360 SMART c3hfinal6 160 195 IPR000571 GO:0046872
Viun7g01036 360 Gene3D - 204 279 - -
Viun7g01036 360 Pfam DRG Family Regulatory Proteins, Tma46 215 300 IPR032378 -
Viun7g01036 360 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Viun7g01036 360 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Viun7g01036 360 MobiDBLite consensus disorder prediction 291 305 - -
Viun7g01036 360 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 357 - -
Viun7g01036 360 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Viun7g01036 DFRP_C 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01036 - - gmx:100778701 597.43