Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01031 ATGACAAGGGTTGTCCAGATGAGTGTCGATGGCGACAGCAAAGATCTGAAAGAACTGAGTCAGCGCTTACGAGATGGGAAGAAGATTGCTGGCGGGGAACATGAGTTATGCGAGGGTGATGAAGTGAAATGTAATGGATTAGCTGAAGGAGTTAAGGCTGGACAGGAGGGGACTGTGGAGTCCTCTGCTCCGCAGCATATTCCACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGATTTTTGCATATTAGATCCCTTAAGGTTTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCTAACGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAAGTGGCAATGCCTGGTTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACTCGGAAAAATATTCCAGTAGTTATGATGTCATCTCTTGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTCAAACCCATTCGGAAGAATGAGCTCAAAAACCTGTGGCAGCACGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGAACGCATACGCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGTAGCAATGATGAAGATGATAATGGAAGTGTAGGCCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAGGTTGATAGTCCCAAACCTGTCTCTCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACGTGTGCTCAAGTTGTTCACTCGAATGCTGAAATCGGTGGGAACAAGGTGGCTCCCCTCGGTGCAAAGGAGTGTTCAGAACAGAAGGAACAACTTGTCAAAACTGCAGGTTCTAAACATAGCAATGCACCTGATGCCGCCCCCTCTAAACCACTGGACCTTAATTGTGAAAATCAATCTAGCAAGCTAAGGTGCAAAGGTTTATCATTGTCTGAAGCCATTACTAGCAGTTCTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCTTAAATAAAAGGCTGAAGCCCTCAGATACTGAAAATAAAGGTACTAATAATGATGAAGAATTGCCATCTCTTGACCTTAGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCTGATATTACAATTCAGGATGACAGAAATGTCTTAAGGCGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCAGCCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGTAATTCTCCCTATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCAAGCGGCAATCTTCCTAACCAAAATTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAACTAGCAGTGGCTTCAACCAAATGTTTGTACCAAACATCTGCTTTCCAGCCTATAAAAAACAACCTTGTCTGTAACTCTCAACAAGTCATCTTACATAACACTGAAGATAAAGCAGCAAGAATGCTGGCACTACCTAAAGTAGACAGACATAGAGATTCTGCTGCTCCAGACTTCCATCTCCATTATGAAAATGGTAACTGTACTGATGACATGCACCAGCTGCCATCTGATCATGATACTGAATCTGCAAAGAAATTGGCTACTGCTGCTACTCCGCATTGTGGTTCATCAAATGTGGTAGAAGTGCTAGTAGAAGGTAATGTTGGAAACCTCAGTAACAATAGAAGTGTTTCAGGCAGCAACAATGGAAGCAATGGCCAAAATGGGGGCAGCACAGCAGTTAATGCTGGAGGAACAAACATGGAAAGCGACAATGGACTCCCTGGGAATAGTGGCAGTGGCGATGCTAGTGGAAGTAGAAGTGCCAACAGAGTAGATCAAAACAAGACTTCTCAAAGGGAAGCAGCCTTGACTAAATTTCGCCAAAAGAGAAAAGAAAGAAAGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCTGAACAACGACCTCGATTTCGTGGACAATTTGTTCGACAGTCGTCTAACGAAAAGACAAGTGAGGCAACGACAGAGAGGTGA 2235 0.4228 MTRVVQMSVDGDSKDLKELSQRLRDGKKIAGGEHELCEGDEVKCNGLAEGVKAGQEGTVESSAPQHIPQPQGAIICWERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTHTQKSVKSKSLEKSDNNSGSNDEDDNGSVGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEIGGNKVAPLGAKECSEQKEQLVKTAGSKHSNAPDAAPSKPLDLNCENQSSKLRCKGLSLSEAITSSSDSQMHSGEFEALNKRLKPSDTENKGTNNDEELPSLDLSLKRLRGVKDADITIQDDRNVLRRSDQSAFSRYNAASNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSSGNLPNQNSNGASNNIDMGSTTNNAYAKSAVISELAVASTKCLYQTSAFQPIKNNLVCNSQQVILHNTEDKAARMLALPKVDRHRDSAAPDFHLHYENGNCTDDMHQLPSDHDTESAKKLATAATPHCGSSNVVEVLVEGNVGNLSNNRSVSGSNNGSNGQNGGSTAVNAGGTNMESDNGLPGNSGSGDASGSRSANRVDQNKTSQREAALTKFRQKRKERKERCFHKKVRYQSRKKLAEQRPRFRGQFVRQSSNEKTSEATTER 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01031 744 MobiDBLite consensus disorder prediction 696 714 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 226 240 - -
Viun7g01031 744 ProSiteProfiles CCT domain profile. 689 731 IPR010402 GO:0005515
Viun7g01031 744 MobiDBLite consensus disorder prediction 437 466 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 382 402 - -
Viun7g01031 744 SMART REC_2 86 201 IPR001789 GO:0000160
Viun7g01031 744 MobiDBLite consensus disorder prediction 624 744 - -
Viun7g01031 744 ProSiteProfiles Response regulatory domain profile. 87 205 IPR001789 GO:0000160
Viun7g01031 744 PANTHER TWO-COMPONENT RESPONSE REGULATOR 86 375 IPR045279 GO:0009736
Viun7g01031 744 Gene3D - 85 240 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 437 496 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 210 225 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 624 688 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 321 347 - -
Viun7g01031 744 SUPERFAMILY CheY-like 84 210 IPR011006 -
Viun7g01031 744 CDD psREC_PRR 88 191 - -
Viun7g01031 744 Pfam Response regulator receiver domain 88 199 IPR001789 GO:0000160
Viun7g01031 744 MobiDBLite consensus disorder prediction 210 282 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 476 496 - -
Viun7g01031 744 MobiDBLite consensus disorder prediction 241 271 - -
Viun7g01031 744 Pfam CCT motif 686 731 IPR010402 GO:0005515
Viun7g01031 744 FunFam Two-component response regulator-like PRR37 86 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01031 Viun-Chr7 10785985 10808666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01031 162 733 Response Regulator Gene Family AT5G02810 48.714 1.01e-114 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Viun7g01031 Response_reg 3.3e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01031 K12129 - gmx:100806454 1181.78