Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01030 ATGACAAGGGTTGTCCAGATGAGTGTCGATGGCGACAGCAAAGATCTGAAAGAACTGAGTCAGCGCTTACGAGATGGGAAGAAGATTGCTGGCGGGGAACATGAGTTATGCGAGGGTGATGAAGTGAAATGTAATGGATTAGCTGAAGGAGTTAAGGCTGGACAGGAGGGGACTGTGGAGTCCTCTGCTCCGCAGCATATTCCACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGATTTTTGCATATTAGATCCCTTAAGGTTTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCTAACGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAAGTGGCAATGCCTGGTTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACTCGGAAAAATATTCCAGTAGTTATGATGTCATCTCTTGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTCAAACCCATTCGGAAGAATGAGCTCAAAAACCTGTGGCAGCACGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGAACGCATACGCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGTAGCAATGATGAAGATGATAATGGAAGTGTAGGCCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAGGTTGATAGTCCCAAACCTGTCTCTCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACGTGTGCTCAAGTTGTTCACTCGAATGCTGAAATCGGTGGGAACAAGGTGGCTCCCCTCGGTGCAAAGGAGTGTTCAGAACAGAAGGAACAACTTGGTTCTAAACATAGCAATGCACCTGATGCCGCCCCCTCTAAACCACTGGACCTTAATTGTGAAAATCAATCTAGCAAGCTAAGGTGCAAAGGTTTATCATTGTCTGAAGCCATTACTAGCAGTTCTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCTTAAATAAAAGGCTGAAGCCCTCAGATACTGAAAATAAAGGTACTAATAATGATGAAGAATTGCCATCTCTTGACCTTAGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCTGATATTACAATTCAGGATGACAGAAATGTCTTAAGGCGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCAGCCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGTAATTCTCCCTATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCAAGCGGCAATCTTCCTAACCAAAATTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAACTAGCAGTGGCTTCAACCAAATGTTTGTACCAAACATCTGCTTTCCAGCCTATAAAAAACAACCTTGTCTGTAACTCTCAACAAGTCATCTTACATAACACTGAAGATAAAGCAGCAAGAATGCTGGCACTACCTAAAGTAGACAGACATAGAGATTCTGCTGCTCCAGACTTCCATCTCCATTATGAAAATGGTAACTGTACTGATGACATGCACCAGCTGCCATCTGATCATGATACTGAATCTGCAAAGAAATTGGCTACTGCTGCTACTCCGCATTGTGGTTCATCAAATGTGGTAGAAGTGCTAGTAGAAGGTAATGTTGGAAACCTCAGTAACAATAGAAGTGTTTCAGGCAGCAACAATGGAAGCAATGGCCAAAATGGGGGCAGCACAGCAGTTAATGCTGGAGGAACAAACATGGAAAGCGACAATGGACTCCCTGGGAATAGTGGCAGTGGCGATGCTAGTGGAAGTAGAAGTGCCAACAGAGTAGATCAAAACAAGACTTCTCAAAGGGAAGCAGCCTTGACTAAATTTCGCCAAAAGAGAAAAGAAAGAAAGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCTGAACAACGACCTCGATTTCGTGGACAATTTGTTCGACAGTCGTCTAACGAAAAGACAAGTGAGGCAACGACAGAGAGGTGA 2223 0.4229 MTRVVQMSVDGDSKDLKELSQRLRDGKKIAGGEHELCEGDEVKCNGLAEGVKAGQEGTVESSAPQHIPQPQGAIICWERFLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTHTQKSVKSKSLEKSDNNSGSNDEDDNGSVGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEIGGNKVAPLGAKECSEQKEQLGSKHSNAPDAAPSKPLDLNCENQSSKLRCKGLSLSEAITSSSDSQMHSGEFEALNKRLKPSDTENKGTNNDEELPSLDLSLKRLRGVKDADITIQDDRNVLRRSDQSAFSRYNAASNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSSGNLPNQNSNGASNNIDMGSTTNNAYAKSAVISELAVASTKCLYQTSAFQPIKNNLVCNSQQVILHNTEDKAARMLALPKVDRHRDSAAPDFHLHYENGNCTDDMHQLPSDHDTESAKKLATAATPHCGSSNVVEVLVEGNVGNLSNNRSVSGSNNGSNGQNGGSTAVNAGGTNMESDNGLPGNSGSGDASGSRSANRVDQNKTSQREAALTKFRQKRKERKERCFHKKVRYQSRKKLAEQRPRFRGQFVRQSSNEKTSEATTER 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01030 740 PANTHER TWO-COMPONENT RESPONSE REGULATOR 86 371 IPR045279 GO:0009736
Viun7g01030 740 MobiDBLite consensus disorder prediction 317 342 - -
Viun7g01030 740 MobiDBLite consensus disorder prediction 692 710 - -
Viun7g01030 740 FunFam Two-component response regulator-like PRR37 86 244 - -
Viun7g01030 740 MobiDBLite consensus disorder prediction 226 240 - -
Viun7g01030 740 Pfam CCT motif 682 727 IPR010402 GO:0005515
Viun7g01030 740 MobiDBLite consensus disorder prediction 378 398 - -
Viun7g01030 740 SMART REC_2 86 201 IPR001789 GO:0000160
Viun7g01030 740 MobiDBLite consensus disorder prediction 620 740 - -
Viun7g01030 740 ProSiteProfiles Response regulatory domain profile. 87 205 IPR001789 GO:0000160
Viun7g01030 740 MobiDBLite consensus disorder prediction 433 462 - -
Viun7g01030 740 MobiDBLite consensus disorder prediction 433 492 - -
Viun7g01030 740 Gene3D - 85 239 - -
Viun7g01030 740 ProSiteProfiles CCT domain profile. 685 727 IPR010402 GO:0005515
Viun7g01030 740 MobiDBLite consensus disorder prediction 210 225 - -
Viun7g01030 740 MobiDBLite consensus disorder prediction 620 684 - -
Viun7g01030 740 SUPERFAMILY CheY-like 84 210 IPR011006 -
Viun7g01030 740 CDD psREC_PRR 88 191 - -
Viun7g01030 740 Pfam Response regulator receiver domain 88 199 IPR001789 GO:0000160
Viun7g01030 740 MobiDBLite consensus disorder prediction 210 282 - -
Viun7g01030 740 MobiDBLite consensus disorder prediction 241 271 - -
Viun7g01030 740 MobiDBLite consensus disorder prediction 472 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01030 Viun-Chr7 10785985 10808668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01030 162 729 Response Regulator Gene Family AT5G02810 47.910 6.00e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Viun7g01030 Response_reg 3.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01030 K12129 - gmx:100806454 1169.07