Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00987 ATGGACGCAACAATCCCCAATGGTAAGGACGCTTTTTGCGTCACTGCCGCCAATGCCGCGGGGGACCCGCTCAACTGGGCCGCCGCGGCCCACGCGCTCTCGGGAACCCATCTCGACGAGGTCAAGCGCATGGTCGCCGACTACCGCAAGCCCGCCGTGCGCCTCGGCGGCGAGACGCTCACCGTCGCTCAGGTCGCGGCCATTGCGGCGCACGATCAGGGTCTCAAGGTCGAGCTGGCGGAGGCCGCCAGGGCCGGCGTCAAGGCCAGCAGTGACTGGGTCATGGACAGCATGGACAAGGGCACCGACAGTTACGGTGTCACCACCGGCTTCGGTGCCACCTCCCACCGCCGTACCAAACAAGGTGGCGCCTTGCAGAAGGAGCTTATCAGGTTTTTGAATGCTGGGATATTTGGAAACGGTACAGAGTCAAATTGCACCCTACCCCACACTGCAACCAGAGCAGCCATGCTTGTGAGAGTGAACACTCTTCTCCAAGGTTACTCCGGAATCAGATTTGAAATTTTGGAGGCCATCACCAAGCTGTTGAACAACAACGTTACTCCATGTTTGCCACTCAGGGGAACAATAACAGCATCTGGTGATCTCGTACCTTTGTCGTACATTGCCGGTTTGTTAACTGGCAGACCAAACTCCAAGGCTGTGGGTCCCTCTGGGGAGATTCTGAATGCTAAGGAAGCCTTTGAATTGGCCAACATCGGTTCCGAGTTCTTTGAGTTGCAACCTAAGGAAGGGCTTGCCCTTGTGAATGGTACAGCTGTTGGCTCTGGCTTGGCCTCCATTGTTCTCTTCGAAGCAAACATTCTCGCTGTCTTGTCCGAAGTTATCTCAGCAGTGTTTGCTGAAGTGATGCAAGGAAAGCCCGAGTTCACTGATCATTTGACTCACAAGCTGAAGCACCACCCTGGCCAGATTGAAGCTGCAGCTATCATGGAACACATTTTGGATGGAAGCTCTTACATCAAAGCTGCGAAGAAGATGCACGAGGTTGATCCTTTGCAGAAACCCAAACAAGATCGCTATGCCCTTAGAACTTCACCCCAATGGCTTGGTCCTCAGATTGAAGTGATCAGGTTCTCTACCAAGTCCATTGAGAGGGAGATAAACTCGGTCAACGACAACCCTTTGATTGATGTGTCAAGGAACAAGGCCTTGCATGGTGGTAACTTCCAAGGAACTCCCATTGGAGTCTCCATGGATAACACCCGTTTGGCTCTTGCTTCCATTGGCAAACTCATGTTCGCTCAATTCTCTGAGCTTGTCAATGACTATTACAACAATGGATTGCCTTCGAATCTCACTGCCAGCAGAAACCCCAGCTTGGATTACGGTTTCAAGGGAGCTGAAATTGCCATGGCTTCTTACTGCTCCGAACTCCAGTATTTGGCTAACCCTGTGACCAGCCATGTCCAAAGCGCGGAGCAACACAACCAAGATGTGAACTCTTTGGGGTTGATTTCGTCTAGGAAAACCAACGAGGCTGTTGAGATCCTGAAGCTGATGTCTTCAACTTTCCTCGTTGCGCTTTGCCAGGCCATTGACTTGAGGCATTTGGAGGAGAATTTGAAGAACACTGTGAAGAATGTGGTGAGCCAAGTTGCCAAGAGGACTCTCACCACAGGTGTCAATGGAGAACTTCACCCTTCCAGATTTTGTGAGAAAGACTTGTTGAAAGTTGTTGATAGAGAGTACACGTATGCCTACATTGACGACCCCTGCAGTGGCACGTACCCTTTGATGCAGAAACTGAGGCAAGTGCTTGTGGAGTATGCATTGGCCAATGGAGAGAATGAGAAGAACTTGAACACATCGATCTTCCAAAAGATTGCATCTTTTGAGGAGGAGTTGAAGACCCTCTTGCCTAAGGAAGTGGAAGGTGCAAGACTTGCGTATGAGAATGACCAGTGTGCAATTCCCAACAAGATCAAGGAATGTAGGTCTTACCCGTTGTACAAGTTTGTGAGAGAGGAGTTAGGGACATCGTTGCTGACTGGTGAAAAGGTTATCTCACCCGGTGAAGAGTGTGACAAGGTGTTCACTGCCATGTGCCAAGGGAAAATCATTGATCCTCTTTTGGAATGCCTTGGAGAGTGGAATGGTGCTCCTCTTCCAATTTCTTAG 2142 0.507 MDATIPNGKDAFCVTAANAAGDPLNWAAAAHALSGTHLDEVKRMVADYRKPAVRLGGETLTVAQVAAIAAHDQGLKVELAEAARAGVKASSDWVMDSMDKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFELANIGSEFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVISAVFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKMHEVDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAVEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTYAYIDDPCSGTYPLMQKLRQVLVEYALANGENEKNLNTSIFQKIASFEEELKTLLPKEVEGARLAYENDQCAIPNKIKECRSYPLYKFVREELGTSLLTGEKVISPGEECDKVFTAMCQGKIIDPLLECLGEWNGAPLPIS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00987 713 PANTHER HISTIDINE AMMONIA-LYASE 21 712 IPR001106 -
Viun7g00987 713 Pfam Aromatic amino acid lyase 60 540 IPR001106 -
Viun7g00987 713 Gene3D - 526 647 IPR023144 -
Viun7g00987 713 NCBIfam phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
Viun7g00987 713 FunFam Phenylalanine ammonia-lyase 260 568 - -
Viun7g00987 713 Gene3D - 13 259 IPR024083 -
Viun7g00987 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Viun7g00987 713 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824
Viun7g00987 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Viun7g00987 713 FunFam Phenylalanine ammonia-lyase 13 259 - -
Viun7g00987 713 CDD PAL-HAL 58 523 IPR001106 -
Viun7g00987 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00987 Viun-Chr7 9900253 9904967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00987 20 712 Monolignol Biosynthesis Gene Families AT2G37040 83.261 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00987 K10775 - gmx:100803857 1330.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00987 7 9900253 9904967 Viun7g02890 7 32140322 32145880 ECH
Viun7g00987 7 9900253 9904967 Viun7g00987 7 9900253 9904967 ECH