Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00984 ATGAAGTCAAGATTTCTCAGAGGGTGTCTGAACAAGTGCAAGAAAATGTGCCTGAACAAGTGCATATCTTGTGAGGAATGCTGTGAAAGGGGTTGGTGGTGTTCTCTTCGTGAAGGGTGTTCCAATATTCCAAGTGATGTTCCAAAGGGCCACTTGGTTGTGTATGTGGGAGAGAAGCACAAGAGATATGTGATCAAGATTGGTTTGCTCCATCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTACGATTTCATTGCAGACTCAAAACTCTGCATTCCCTGCGATGAACACCTCTTTCTCAGTGTTGTTCGATGTGCTAGCTCCCCACAGAACCAACCGGTGTGTCTGTGTCTCTGA 369 0.4634 MKSRFLRGCLNKCKKMCLNKCISCEECCERGWWCSLREGCSNIPSDVPKGHLVVYVGEKHKRYVIKIGLLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVVRCASSPQNQPVCLCL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00984 122 Pfam Auxin responsive protein 38 108 IPR003676 GO:0009733
Viun7g00984 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00984 Viun-Chr7 9865410 9866026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00984 32 112 Calmodulin-binding Proteins AT4G34750 47.126 4.70e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00984 K14488 - gmx:100812927 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00984 7 9865410 9866026 Viun7g00984 7 9865410 9866026 ECH
Viun1g02378 1 34269386 34269928 Viun7g00984 7 9865410 9866026 PCT