Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00979 ATGCCAAAGAGTAGCTTGGATTCTCATACAACTTTGAACAGGAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTAGATGATGTGGAAATCGATGATCTTGAAGGAGCTGACGGTTTCCCGGGTGCATGTGAAGAATATTTTTTGGATTTTGAATTTGCTGACAAATTTGAGGAGGTACTGGGTTCTGGTCCTTTTGAAGGTTCGGAAAGTCATTCTTCAGGATTAAGTAGAAGTAGCATTGTTGGTGGGGTTTTAGAATCAACAGAAGTACCCATTGCACAATCTGAAAGCAAAAACGATTCTCTGGATGAGACACTAACCTATGAATCACATGGTGCCTTCAGCAACAATCCTAGTCAACCATCACAAGGAAATTGCAGGTACAACATTTCACTTGATATACAGCATCTTCAAGAGTTGGATAACTATCGTCATTTAGCTGGTCTGACTTATAAGAAGGAAAAGGGTCCTACCGAAAAAGGTCAACCTGCTGCACTGAGAGAGAAAAGATTCCGGAAGCCTACGCAAAGATATATTGAAGAATTTTCAAATGCGAGGCCAAAGGAAAAGGTACCACCTGCTGGTACAAAAACTAAACATTCGAGTGACTCATCATGTAATGTACTTCATATAAGAATTAAATCATTGAAAAGGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGAGGTGATGCTTCCTGAGTTGCAAGTTCGCAAAGGGCATCAGAAGAAAGAGAAACTTCAGTTTGAGTATGAATCATTTCCCTCGGAATCTGAGGATGGATGTTCAACCACAAAAAGGTCTAGAAGAAAAGATAGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGTTGGACTGATATTAAGAAGTTTTTGTTTTCTTCTTCAAGCTACAGAACTCCCATAGATCTGAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGTGCAGAAAAACAAGAAAGAGGCTGAGCAAAATGACGAGTTAGCCCTGCGTCCGTTACCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAGTTGCGTGTTAGCCAAGCTGGCACCTCTGTCGTTGCAGATTCTCCTCCCGTTAGTCTTAGCAAAAGAAATGTACGTAGAAAGTTTACTTAG 1224 0.4134 MPKSSLDSHTTLNRKDDLELEVLDGLLDDVEIDDLEGADGFPGACEEYFLDFEFADKFEEVLGSGPFEGSESHSSGLSRSSIVGGVLESTEVPIAQSESKNDSLDETLTYESHGAFSNNPSQPSQGNCRYNISLDIQHLQELDNYRHLAGLTYKKEKGPTEKGQPAALREKRFRKPTQRYIEEFSNARPKEKVPPAGTKTKHSSDSSCNVLHIRIKSLKRSPSEKSSNENSEVMLPELQVRKGHQKKEKLQFEYESFPSESEDGCSTTKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKKFLFSSSSYRTPIDLRDKWRNLLRASSVQKNKKEAEQNDELALRPLPFNVVHRVRELAKIHPYPRQRGSKKLRVSQAGTSVVADSPPVSLSKRNVRRKFT 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00979 407 MobiDBLite consensus disorder prediction 372 394 - -
Viun7g00979 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 274 334 IPR017930 -
Viun7g00979 407 Gene3D - 268 381 - -
Viun7g00979 407 SMART sant 279 332 IPR001005 -
Viun7g00979 407 MobiDBLite consensus disorder prediction 239 256 - -
Viun7g00979 407 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 14 381 - -
Viun7g00979 407 Pfam Myb-like DNA-binding domain 282 330 IPR001005 -
Viun7g00979 407 SUPERFAMILY Homeodomain-like 282 350 IPR009057 -
Viun7g00979 407 MobiDBLite consensus disorder prediction 181 198 - -
Viun7g00979 407 CDD SANT_TRF 281 331 - -
Viun7g00979 407 ProSiteProfiles Myb-like domain profile. 275 330 IPR001005 -
Viun7g00979 407 MobiDBLite consensus disorder prediction 181 279 - -
Viun7g00979 407 MobiDBLite consensus disorder prediction 379 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00979 Viun-Chr7 9851433 9860545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00979 280 330 Single Myb Histone (SMH) Gene Family AT1G15720 49.020 2.24e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g00979 Myb_DNA-binding 7.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00979 - - gmx:100810255 636.721