Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00978 ATGAATGAGCGAGGATGCTATTCAACAGAACATGAGATGGATTGTGAAGATTATTTGCGGAAGTGTTCCAATAGGAAATGCCAAAGAGTTCAGGTGGATGAATCATATGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAACAATCTTGCTCCCCAGGATGGTAGCTTGGATTCTCATACAACTTTGAACAGGAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTAGATGATGTGGAAATCGATGATCTTGAAGGAGCTGACGGTTTCCCGGGTGCATGTGAAGAATATTTTTTGGATTTTGAATTTGCTGACAAATTTGAGGAGGTACTGGGTTCTGGTCCTTTTGAAGGTTCGGAAAGTCATTCTTCAGGATTAAGTAGAAGTAGCATTGTTGGTGGGGTTTTAGAATCAACAGAAGTACCCATTGCACAATCTGAAAGCAAAAACGATTCTCTGGATGAGACACTAACCTATGAATCACATGGTGCCTTCAGCAACAATCCTAGTCAACCATCACAAGGAAATTGCAGGTACAACATTTCACTTGATATACAGCATCTTCAAGAGTTGGATAACTATCGTCATTTAGCTGGTCTGACTTATAAGAAGGAAAAGGGTCCTACCGAAAAAGGTCAACCTGCTGCACTGAGAGAGAAAAGATTCCGGAAGCCTACGCAAAGATATATTGAAGAATTTTCAAATGCGAGGCCAAAGGAAAAGGTACCACCTGCTGGTACAAAAACTAAACATTCGAGTGACTCATCATGTAATGTACTTCATATAAGAATTAAATCATTGAAAAGGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGAGGTGATGCTTCCTGAGTTGCAAGTTCGCAAAGGGCATCAGAAGAAAGAGAAACTTCAGTTTGAGTATGAATCATTTCCCTCGGAATCTGAGGATGGATGTTCAACCACAAAAAGGTCTAGAAGAAAAGATAGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGTTGGACTGATATTAAGAAGTTTTTGTTTTCTTCTTCAAGCTACAGAACTCCCATAGATCTGAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGTGCAGAAAAACAAGAAAGAGGCTGAGCAAAATGACGAGTTAGCCCTGCGTCCGTTACCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAGTTGCGTGTTAGCCAAGCTGGCACCTCTGTCGTTGCAGATTCTCCTCCCGTTAGTCTTAGCAAAAGAAATGTACGTAGAAAGTTTACTTAG 1401 0.4133 MNERGCYSTEHEMDCEDYLRKCSNRKCQRVQVDESYVPALQDEVMEVEHLLAEPRNNLAPQDGSLDSHTTLNRKDDLELEVLDGLLDDVEIDDLEGADGFPGACEEYFLDFEFADKFEEVLGSGPFEGSESHSSGLSRSSIVGGVLESTEVPIAQSESKNDSLDETLTYESHGAFSNNPSQPSQGNCRYNISLDIQHLQELDNYRHLAGLTYKKEKGPTEKGQPAALREKRFRKPTQRYIEEFSNARPKEKVPPAGTKTKHSSDSSCNVLHIRIKSLKRSPSEKSSNENSEVMLPELQVRKGHQKKEKLQFEYESFPSESEDGCSTTKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKKFLFSSSSYRTPIDLRDKWRNLLRASSVQKNKKEAEQNDELALRPLPFNVVHRVRELAKIHPYPRQRGSKKLRVSQAGTSVVADSPPVSLSKRNVRRKFT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00978 466 Gene3D - 327 440 - -
Viun7g00978 466 ProSiteProfiles Myb-like domain profile. 334 389 IPR001005 -
Viun7g00978 466 Pfam Myb-like DNA-binding domain 341 389 IPR001005 -
Viun7g00978 466 MobiDBLite consensus disorder prediction 438 453 - -
Viun7g00978 466 MobiDBLite consensus disorder prediction 298 315 - -
Viun7g00978 466 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 20 440 - -
Viun7g00978 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 333 393 IPR017930 -
Viun7g00978 466 SUPERFAMILY Homeodomain-like 341 409 IPR009057 -
Viun7g00978 466 MobiDBLite consensus disorder prediction 240 338 - -
Viun7g00978 466 CDD SANT_TRF 340 390 - -
Viun7g00978 466 MobiDBLite consensus disorder prediction 431 453 - -
Viun7g00978 466 SMART sant 338 391 IPR001005 -
Viun7g00978 466 MobiDBLite consensus disorder prediction 240 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00978 Viun-Chr7 9851432 9860545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00978 339 389 Single Myb Histone (SMH) Gene Family AT1G15720 49.020 2.64e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g00978 Myb_DNA-binding 9.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00978 - - gmx:100810255 725.317