Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00976 ATGAATGAGCGAGGATGCTATTCAACAGAACATGAGATGGATTGTGAAGATTATTTGCGGAAGTGTTCCAATAGGAAATGCCAAAGAGTTCAGGTGGATGAATCATATGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAACAATCTTGCTCCCCAGGATGGTAGCTTGGATTCTCATACAACTTTGAACAGGAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTAGATGATGTGGAAATCGATGATCTTGAAGGAGCTGACGGTTTCCCGGGTGCATGTGAAGAATATTTTTTGGATTTTGAATTTGCTGACAAATTTGAGGAGGTACTGGGTTCTGGTCCTTTTGAAGGTTCGGAAAGTCATTCTTCAGGATTAAGTAGAAGTAGCATTGTTGGTGGGGTTTTAGAATCAACAGAAGTACCCATTGCACAATCTGAAAGCAAAAACGATTCTCTGGATGAGACACTAACCTATGAATCACATGGTGCCTTCAGCAACAATCCTAGTCAACCATCACAAGGAAATTGCAGGTACAACATTTCACTTGATATACAGCATCTTCAAGAGTTGGATAACTATCGTCATTTAGCTGGTCTGACTTATAAGAAGGAAAAGGGTCCTACCGAAAAAGGTCAACCTGCTGCACTGAGAGAGAAAAGATTCCGGAAGCCTACGCAAAGATATATTGAAGAATTTTCAAATGCGAGGCCAAAGGAAAAGGTACCACCTGCTGGTACAAAAACTAAACATTCGAGTGACTCATCATGTAATGTACTTCATATAAGAATTAAATCATTGAAAAGGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGAGGTGATGCTTCCTGAGTTGCAAGTTCGCAAAGGGCATCAGAAGAAAGAGTTTGAGTATGAATCATTTCCCTCGGAATCTGAGGATGGATGTTCAACCACAAAAAGGTCTAGAAGAAAAGATAGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGTTGGACTGATATTAAGAAGTTTTTGTTTTCTTCTTCAAGCTACAGAACTCCCATAGATCTGAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGTGCAGAAAAACAAGAAAGAGGCTGAGCAAAATGACGAGTTAGCCCTGCGTCCGTTACCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAGTTGCGTGTTAGCCAAGCTGGCACCTCTGTCGTTGCAGATTCTCCTCCCGTTAGTCTTAGCAAAAGAAATGTACGTAGAAAGTTTACTTAG 1392 0.4138 MNERGCYSTEHEMDCEDYLRKCSNRKCQRVQVDESYVPALQDEVMEVEHLLAEPRNNLAPQDGSLDSHTTLNRKDDLELEVLDGLLDDVEIDDLEGADGFPGACEEYFLDFEFADKFEEVLGSGPFEGSESHSSGLSRSSIVGGVLESTEVPIAQSESKNDSLDETLTYESHGAFSNNPSQPSQGNCRYNISLDIQHLQELDNYRHLAGLTYKKEKGPTEKGQPAALREKRFRKPTQRYIEEFSNARPKEKVPPAGTKTKHSSDSSCNVLHIRIKSLKRSPSEKSSNENSEVMLPELQVRKGHQKKEFEYESFPSESEDGCSTTKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKKFLFSSSSYRTPIDLRDKWRNLLRASSVQKNKKEAEQNDELALRPLPFNVVHRVRELAKIHPYPRQRGSKKLRVSQAGTSVVADSPPVSLSKRNVRRKFT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00976 463 Gene3D - 324 437 - -
Viun7g00976 463 MobiDBLite consensus disorder prediction 428 450 - -
Viun7g00976 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 330 390 IPR017930 -
Viun7g00976 463 MobiDBLite consensus disorder prediction 298 313 - -
Viun7g00976 463 MobiDBLite consensus disorder prediction 435 450 - -
Viun7g00976 463 CDD SANT_TRF 337 387 - -
Viun7g00976 463 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 20 437 - -
Viun7g00976 463 SMART sant 335 388 IPR001005 -
Viun7g00976 463 Pfam Myb-like DNA-binding domain 338 386 IPR001005 -
Viun7g00976 463 MobiDBLite consensus disorder prediction 243 335 - -
Viun7g00976 463 MobiDBLite consensus disorder prediction 243 257 - -
Viun7g00976 463 SUPERFAMILY Homeodomain-like 338 406 IPR009057 -
Viun7g00976 463 ProSiteProfiles Myb-like domain profile. 331 386 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00976 Viun-Chr7 9851430 9860545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00976 336 386 Single Myb Histone (SMH) Gene Family AT1G15720 49.020 2.69e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g00976 Myb_DNA-binding 9.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00976 - - gmx:100810255 710.679