Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00974 ATGAGGAACCATGTTTCTTCCCTCTCTTTCCTCTTCCTCTTCCTCTTCATCCCTTTCTTCCCCACCATTCAATGCGCCGACAACACTTTCGCCCCATCCTTTTACACCGAAGAGATTTACAAGGAGCTTGAAAACCTCGCCATTCTCTTAAACAAGGACATCAAAGCAGGTTTAGGTTTCTGCATCAAGGATGTGCACAAAGATTGGGAGGAAGCATTTGATTTTAAAGGAAGGTTGGATTTCGTGGATTCTTGCGTTAAGAAAAAAGGGGATTTCAGAGACAGAATATGTACTGTGTCGGAAATAAGGTACTACTTCCATGGTTTCCTCGAACAAGGGGCAACATCTAGCAATTATGTAAAACCTAACAGGAACTGCAACTTGACCTCCTGGGTTTCTGGTTGTGAACCTGGATGGAGTTGCAGTGCTGGCAAAAATTTTGACCTCAAAAAGGACATTAAAGACATTCCCATTAGAACCAGTAACTGTCAGGCTTGTTGTGAGGGGTTTTTCTGCCCTCAGGGGTTGACTTGCATGATACCTTGCCCACTAGGTTCTTATTGTCCAATTGCAAAATTGAATAATGCTACTGGAGTATGTGACCCATATAGTTACCAAATACCTCAGGGAGAAACAAATCATAGTTGTGGCAGTGCTGACATTTGGACTGGCGTGGTGAACAATAGTGATATCTTTTGTTCTCCAGGATCATACTGCCCCACTACAACACGTAAAGTCTCTTGTGATAGTGGATATTATTGCAGGAGGGGTTCTACTCATCAAAATAAATGCTCCAGCTTGAGTTCCTGCAATCCAAACACAGCAAACCAAAACATGCATGCATATGGCGCTTTGCTTATTGTTGCATTGAGCACTCTCCTGATCTTCATTTATAATTGTTCTGATCAAGTTCTAGTAACTCGAGAAAGGAGAAAGGCAAAATCTAGAGAAGCTGCTGCTAGACAGGTAAGGGAAACTGTGCAGGCTAGGGAACGGTGGAAAATAGCAAAAGATATTGCTAAGAAAGGTAAAGGAGGGGGTGGATTGGGTGAGCAATTATCTCGAACCTTTTCTAGAAAAAAGTCAGCGAAATCAGACACCTTAAAGGTTGGTAACCAAGCTAAACGTGGTGGAGATACGTTTTTGCCATCGGTGCAAAATGCTTCAAGCTTTGAGCAACAATCTGCAGCTTCAGACGCGCAAAAAAAGGAACCTACCAACCTTACTAAAATGTTGAATTCCCTTGAGGATGACCCACATAGCAATGAAGGATTCAACCTACAAATTGGAGATAAAAACATCAAAAAGCAGATGCCAAAGGGCAAGAATTTACATACACAGAGCCAAATTTTAAGGTATGCTTATGGTCAAATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAAGAACTTGACTTTCTCTGGAGTTATTTCGATGGCCACTGAAGGTGAGGTTCGAACAAGGCCTGTGATTGAAGTAGCTTTTAAGGATTTAACTCTGACTTTGAAAGGTAAAAGAAAACATCTATTGAGATGTGTGTACGGTAAACTCATGCCGGGTAGAGTTTCTGCTGTGATGGGTCCCTCAGGAGCTGGCAAAACTACATTTCTTTCTGCATTGGCAGGGAAAGCAAGAGGATGCACTATGACAGGATCAATTCTAATTAATGGAAAGTCCGAATCCATTCACTGTTATCAGAAAATTATTGGTTTTGTTCCACAAGATGATATTGTTCATGGGAACTTGACCGTGGAAGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGCGGATATGCCAAAACCAGACAAGGTTCTGATTGTTGAAAGAGTGATTGAATCCTTAGGACTGCAGGCAGTGAGGGATTCCCTTGTTGGGACGGTAGAGAAACGAGGTATATCTGGAGGACAACGAAAACGTGTAAATGTAGGGATGGAAATGGTTATGGAGCCATCATTGTTAATCTTAGATGAACCTACAACTGGCTTAGACAGTGCATCTTCCACCTTACTGCTTAAAGCACTTCGTCGTGAAGCACTTGAAGGGGTAAATATCTGCATGGTACTTCATCAACCAAGCTATACTTTGTTCAGAATGTTTGATGACATAGTGTTTCTAGCCAAAGGTGGTCTTACTGCATATCATGGTCCTGTTAAGAAAGTGGAAGAATACTTTGCTGGCATTGGAATCAATGTACCTGATAGAGTGAATCCTCCAGACCATTTCATTGACATTTTGGAAGGTTTAGTGAAACCAAATGGAGCTGTGACTCATCAGCAACTTCCTGTGAGATGGATGTTACATAACAGTTACCCAGTACCACCAGATATGCTTCATTTCGCTGATCAAATTGCTGCAGCCTCAACAACTAGCACCGAGCCAATTGCAACAAAGCCCCCAGAAGAAGTTGATGATCAATCCTTTGCTGGAGAGTTTTGGGAGGATATGAAGAGTAATGTTCAGATGCGAAAAGATCATATAGAAGCAACCTTCTTAAAGATTAAGGACTTGTCTAATCGAAGAACTCCTGGTGTAGCTCGACAATACAGATACTACCTTGGACGGGTTTGTAAGCAGACGCTAAGAGAAGGAAAATCACAAGCAGTTGACTACCTCCTTTTATTGGTTGCTGGTGCTATATTAGGAACTCTTACTAAAGTAAATGACGAAACATTTGGGTCCCTCGGATATACCTATACTGTTATTGCTGTCTCTTTACTTTGCAAGATTTCAGCTCTGAGATCATTTTCTCTGGATAAATTACAATATTGGAGGGAGAGTGCATCTGGAATCAGCAATCTGGCACATTTTTTGGCCAAAGATACAATTGATATTTTCAATACAATCATAAAACCTGTAGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGTTTTGCAAGTAATTATGTCATTTTGCTCTGCCTTGTGTACTGTGTAACTGGCATGGCATATGCAATGGCAATTTATTTTGAGCCTGCTCCAGCACAATTGTTCTCAGTGCTTCTCCCAGTTGTTATGACTCTCATTGCAAACCAGAAAAAAGACACTCTCTTCATGAAGATCCTTGTAAAGTTATGCTACCCAAATTGGGCTTTGGAGGCATTTATCATTGCAAATGCTGAAAGGTACACTGGAGTTTGGTTGATAACTCGGTGTAGTTCACTAATGAATAATGGATATAATGTCGGAGACTGGCCTATTTGTTTGCTTGCCCTCTTTTTCTATGGTATAATTGCTCGAGTTGTGGCCTTCTTTTGTTTAATAATCACTCAAAAGAAGTGA 3297 0.4092 MRNHVSSLSFLFLFLFIPFFPTIQCADNTFAPSFYTEEIYKELENLAILLNKDIKAGLGFCIKDVHKDWEEAFDFKGRLDFVDSCVKKKGDFRDRICTVSEIRYYFHGFLEQGATSSNYVKPNRNCNLTSWVSGCEPGWSCSAGKNFDLKKDIKDIPIRTSNCQACCEGFFCPQGLTCMIPCPLGSYCPIAKLNNATGVCDPYSYQIPQGETNHSCGSADIWTGVVNNSDIFCSPGSYCPTTTRKVSCDSGYYCRRGSTHQNKCSSLSSCNPNTANQNMHAYGALLIVALSTLLIFIYNCSDQVLVTRERRKAKSREAAARQVRETVQARERWKIAKDIAKKGKGGGGLGEQLSRTFSRKKSAKSDTLKVGNQAKRGGDTFLPSVQNASSFEQQSAASDAQKKEPTNLTKMLNSLEDDPHSNEGFNLQIGDKNIKKQMPKGKNLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKRKHLLRCVYGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKSESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKKVEEYFAGIGINVPDRVNPPDHFIDILEGLVKPNGAVTHQQLPVRWMLHNSYPVPPDMLHFADQIAAASTTSTEPIATKPPEEVDDQSFAGEFWEDMKSNVQMRKDHIEATFLKIKDLSNRRTPGVARQYRYYLGRVCKQTLREGKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKISALRSFSLDKLQYWRESASGISNLAHFLAKDTIDIFNTIIKPVVYLSMFYFFSNPRSSFASNYVILLCLVYCVTGMAYAMAIYFEPAPAQLFSVLLPVVMTLIANQKKDTLFMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNNGYNVGDWPICLLALFFYGIIARVVAFFCLIITQKK 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00974 1098 Pfam ABC transporter 515 661 IPR003439 GO:0005524
Viun7g00974 1098 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524|GO:0016887
Viun7g00974 1098 SMART AAA_5 519 711 IPR003593 GO:0016887
Viun7g00974 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 493 716 IPR027417 -
Viun7g00974 1098 CDD ABCG_EPDR 491 717 - -
Viun7g00974 1098 MobiDBLite consensus disorder prediction 341 384 - -
Viun7g00974 1098 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 436 1083 - -
Viun7g00974 1098 Gene3D - 483 729 IPR027417 -
Viun7g00974 1098 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 734 IPR003439 GO:0005524
Viun7g00974 1098 FunFam ABC transporter G family member 24 487 729 - -
Viun7g00974 1098 Pfam ABC-2 type transporter 691 1098 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00974 Viun-Chr7 9834484 9840619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00974 520 713 Calmodulin-binding Proteins AT2G36910 28.218 3.63e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00974 - - gmx:100812387 1928.29