Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00973 ATGCCAAACACGGAAGAAAAAAAGGGGATTTTTGGTTTTGTTGGGTCAGAAAAGCCGAAGCTTTTTGGGGTCAATTTATATCTATTTGAGTCTAGTTCAAGTCAGGTAGCAATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTCCTAAGACCTTGCAATCGATATCGGGTCGGTCCAACAGTTCTACTAATGTTGAGGCTGAGATGAGAAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACACCAGCACAGACTCCCTTAGGAGAAATGCATTTCCCAGTTTGTCTCAAAGACCCAGCAACCTCAGAGTATTTACTGTACCCGAACTAAAAACAGCCACAAAGAGTTTTAGTCGCTCTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTTGATGATCCTTCCACAAGAATTGAAGTTGCTGTTAAACAGCTTGGCAGAAGAGGAATTCAGGGGCACAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCAAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGGTTTATGAATATATGCCAAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTACCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATTCTTTTGGACGAGCAGTGGAAGGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTAGTTGGAACAATGGGTTATGCAGCTCCAGAGTATATTCAAACTGGACGTCTTACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAGCTAATCACTGGCCGGCGGCCGATTGACCGGAACCGGCCGAAGGGTGAGCAGAAGATGTTGGAATGGATAAGGCCATACCTTTCAGATGGAAGGAAATTTCAATTAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTCAAGTCAGCACAAAAACTTGCTGTAATAGCCAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCTAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTTGTAGCCTCAGAAGAAGCTTCTACTGAAACAGTGAACAACAAAATTACCATGGATCAACAACCAGATTGTAATTGGTTAAGGTTGTGGAGGCCAAAATTTTTGAGTACATGGTTGTAG 1383 0.4317 MPNTEEKKGIFGFVGSEKPKLFGVNLYLFESSSSQVAMKCFPFYFGEKKDGPKTLQSISGRSNSSTNVEAEMRRSGSELNSMDASDTSTDSLRRNAFPSLSQRPSNLRVFTVPELKTATKSFSRSVMLGEGGFGCVYKGLIKSVDDPSTRIEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLPWNRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWKAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWIRPYLSDGRKFQLILDPRLERKHLFKSAQKLAVIANKCLVRNPKNRPKMSEVLQMVTQVVESSVSTNPQPPLKSVVASEEASTETVNNKITMDQQPDCNWLRLWRPKFLSTWL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00973 460 PANTHER OS01G0588500 PROTEIN-RELATED 80 406 - -
Viun7g00973 460 Pfam Protein kinase domain 124 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00973 460 SUPERFAMILY Protein kinase-like (PK-like) 98 403 IPR011009 -
Viun7g00973 460 CDD STKc_IRAK 128 405 - -
Viun7g00973 460 Gene3D Transferase(Phosphotransferase) domain 1 208 423 - -
Viun7g00973 460 Gene3D Phosphorylase Kinase; domain 1 95 207 - -
Viun7g00973 460 MobiDBLite consensus disorder prediction 55 98 - -
Viun7g00973 460 MobiDBLite consensus disorder prediction 54 98 - -
Viun7g00973 460 FunFam Serine/threonine-protein kinase PCRK2 208 417 - -
Viun7g00973 460 FunFam Serine/threonine-protein kinase BIK1 89 207 - -
Viun7g00973 460 ProSiteProfiles Protein kinase domain profile. 122 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00973 460 ProSitePatterns Protein kinases ATP-binding region signature. 128 156 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00973 Viun-Chr7 9825883 9830012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00973 38 431 Glycoside Hydrolase AT3G07070 41.646 5.77e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun7g00973 Pkinase 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00973 - - gmx:100305438 804.283