Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00968 ATGGTAAAGAGTGAGAGGAGTTTTGTAGTTGATCTGAGTTACAGGGTGGGGAGAGTGGAGAGATTTGAAAACGCAAAACTGAAGGCCCACTCACCTCAAATCCACGCAACTATTACTATAAAACCCCTCACTCACTCTGCTTTGTGGGGTCACAATTTCAACACACAAAACCCTAAATTCCCAAATTCCCCAAACCCTACAATGACCTCACAAGTTGTCCTACAAAATTTCCCTCACTCCGAAACCAAACCCCCAACAACTACCACCACCGATTCTCAACCCACTGCGCCGTCACTCGCCGTCACCAAGAGGTCTTCCGCCGCCGCCACGCGCTCCACTAAGGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGAGTCCGCATGCCTCCGCTCTGCGCCGCTCGCATTTTCCAGCTCACGCGCGAGCTCGGCCACCGCTCCGACGGTGAGACCATCGAGTGGCTCCTCCGCCACGCAGAGCCTTCCATCATTGCAGCCACCGGCTCCGGTACCGTCCCCGCTGCTCCCATCTCCTCAGTCGCAACCTCTCTTCCCTCCTCCGAGTCTTCCGTCTCTGTACCGGTGGTCGGCGGCCAGGGAATGTTCTCCATGGCGCCGCCAAGTTGCCGCCTCGACCTGTCTCCGCCACCGGGGTTGGACTTCGCGGCGTCCAATGGCTATCGGCACATGCCGTTCACGGCCCTGCTGTTGCAGCCGGCTACGGCGGACGATAACCAGAACGACGATTCTCTCGGCGAACAATGA 768 0.5846 MVKSERSFVVDLSYRVGRVERFENAKLKAHSPQIHATITIKPLTHSALWGHNFNTQNPKFPNSPNPTMTSQVVLQNFPHSETKPPTTTTTDSQPTAPSLAVTKRSSAAATRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPAAPISSVATSLPSSESSVSVPVVGGQGMFSMAPPSCRLDLSPPPGLDFAASNGYRHMPFTALLLQPATADDNQNDDSLGEQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00968 255 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 82 199 IPR005333 GO:0003700
Viun7g00968 255 Pfam TCP family transcription factor 112 204 IPR017887 -
Viun7g00968 255 ProSiteProfiles TCP domain profile. 113 167 IPR017887 -
Viun7g00968 255 MobiDBLite consensus disorder prediction 78 122 - -
Viun7g00968 255 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00968 Viun-Chr7 9759523 9760500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00968 113 242 TCP Transcription Factor Family AT2G37000 61.538 4.62e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun7g00968 TCP 4.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00968 - - vun:114191143 465.307