Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00948 ATGCTAAGGTATTTTGTTGGGAGGATTCAAAAGGGTCTTTCAGTGTTTGTGGGTAGAAGGCCTGCATTTAGCTATTTCAGTGAAGATGGTGACCCAAATGAGGCACCAGGTGGTGATGTTATGGAAGGTTATTTTGCTGTTCTTGCAATGAAGGGTAAGGAAAGAAAAAGGTTCATTGTTGGGTTAGATTATTTGTCTGATCCTGCGTTCTTGGGACTGTTGGATAGAGCTCAAGAAGAGTATGGTTTCCGACACCAGGGAGCTCTTGCACTCCCTTGTCGGCCTCAGGAGTTGCAGAAGATTCTAGATGCTCCAAAACCATAG 324 0.4444 MLRYFVGRIQKGLSVFVGRRPAFSYFSEDGDPNEAPGGDVMEGYFAVLAMKGKERKRFIVGLDYLSDPAFLGLLDRAQEEYGFRHQGALALPCRPQELQKILDAPKP 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00948 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 101 IPR003676 GO:0009733
Viun7g00948 107 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00948 Viun-Chr7 9346015 9346620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00948 36 102 Calmodulin-binding Proteins AT3G43120 44.776 6.17e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00948 - K14488 gmx:100818734 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00948 7 9346015 9346620 Viun7g00948 7 9346015 9346620 ECH