Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun7g00942 | ATGTCACAGAATTCTGAGGAGATAAAGACAGTTGAACAGTGGAGATGGTCTGAAATGCAAGGCCTTGAGCTTATGTCCTCTTCAGCTCCAGTTTCTGACTCACATGAATCCAACCCAACATTGGAAGAGAAAAGAGAAGAAAGGGTAATGGAAGAGCCTTCAGTGGCCAAGAAAGATGCTGCTGCTTCTAATGGTACTTGCAGCAGTGGTGGTGGTGGGGATAAGAAGGGTGAGAGCATTTCTTCTGTTCGGTTTGGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTACATTTTAATGGCAATTGGAACGGTTGGAGCATTTGTACATGGTTGCTCCTTGCCACTCTTTCTTCGTTTCTTCGCTGATCTCGTGAATTCATTTGGCTCCAATGCGAATGACTTGGACAAGATGACTCAGGAAGTTGTGAAGTATGCGTTTTACTTCCTGGTGGTGGGGGCTGCCATATGGGCATCCTCCTGGGCAGAGATTTCGTGCTGGATGTGGACAGGTGAGAGACAATCAACGAGAATGAGGATCAGGTATCTGGAGGCAGCGTTGGACCAGGACATTCAATTCTTTGACACCGAGGTTCGAACATCCGATGTTGTTTTCGCCATTAACAGTGATGCTGTCATGGTACAAGATGCCATTAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCGGTCTGGCAACTGGCTCTGGTTACCCTCGCTGTGGTCCCTATAATTGCAGTAATCGGAGGCATTCACACCACCACCTTGGCCAAGTTATCTAGCAAAAGCCAAGAAGCTCTTTCTCAAGCTGGTAACATTGTGGAACAGACAGTTGTTCAAATTCGAGTGGTTTTGGCGTTTGTCGGGGAGACCAGAGCACTGCAGGCCTATTCCTCTGCGTTGAGGACTGCGCAGAAGATTGGCTACAGAACTGGATTTGCAAAGGGAATGGGATTGGGGGCCACATACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGTGGCTATTTGGTTAGACACCACTACACCAACGGAGGACTTGCCATTGCCACCATGTTTTCTGTCATGATCGGTGGATTGGCTTTAGGACAGTCTGCACCTAGCATGGCTGCATTTACTAAGGCCAGAGTTGCTGCTGCTAAGATTTTTCGTGTGATAGATCACAAGCCGGGTATAGACAGAAAGAGTGAATCGGGTTTGCAGTTAGAGAGTGTTACAGGACTAGTAGAGTTGAAAAATGTGAACTTTTCATACCCCTCGAGACCAGAGGTTATGATCCTCAACAATTTCTCATTGAGTGTACCTGCTGGCAAGACCATTGCTCTTGTAGGGAGCAGTGGATCAGGAAAAAGCACAGTCGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGACAAGTAATGCTAGATGAGCATGATGTTAAGACATTGAAGCTTAAATGGTTGAGACAGCAAATAGGACTAGTGAGCCAAGAGCCTGCACTGTTTGCTACCACAATTAGAGAAAACATACTCTTGGGTAGGCCTGATGCGGATCAGGATGAGATTGAAGAAGCTGCAAGAGTGGCCAATGCTCACTCATTTATCATCAAACTTCCCGAAGGTTATGAAACTCAGGTGGGGGAGAGAGGCCTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGATGAGGCCACAAGTGCATTGGACTCAGAGTCAGAAAAGCTGGTTCAGGAGGCCCTTGATCGGTTCATGATTGGCAGAACAACTCTTGTAATCGCTCATCGCCTCTCCACAATTCGCAAAGCTGATCTTGTGGCTGTGCTTCAGCAAGGAAGTGTCACTGAAATTGGAACTCATGATGAACTCTTTGCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAGGAGATGGCACATGAAACTTCTATGACTAATGCCAGAAAGAGTAGTGCTAGGCCTTCAAGCGCCAGAAACTCTGTAAGCTCGCCCATTATAACACGAAATTCTTCTTATGGGCGATCACCATACTCACGCAGACTATCTGACTTTTCTACATCTGATTTTAGTCTGTCCCTTGATGCATCACATGCAAATTACAGGCCAGAAAAGCTTGCCTTCAAAGATCAAGCTAGTTCCTTCTGGCGACTTGCAAAAATGAACTCTCCCGAATGGCTATATGCCTTAATTGGTTCTATAGGATCTGTTGTTTGTGGATCCCTCAGTGCATTTTTTGCTTATGTTCTTAGTGCTGTCCTCAGCGTTTATTACAATCCAAACCACAGACACATGATCCAAGAAATTGAAAAGTACTGTTACTTGTTGATTGGGCTATCATCTGCTGCTCTCCTCTTCAACACATTGCAGCACTCCTTCTGGGATATTGTTGGTGAAAATCTTACGAAACGAGTGAGGGAGAAAATGCTTACTGCAGTGCTTAAAAATGAAATGGCGTGGTTTGATCAGGAGGAAAATGAAAGTGCTCGAATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTTCTTGTAGCCGTATTCCCGGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGCGACCTGGAAGCTGCTCATGCCAAGGCCACTCAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCTGCTTTTAATTCAGAAAGGAAAATTGTTGGCCTTTTCACATCCAACCTTGAAACTCCACTGCGGCGCTGTTTTTGGAAGGGACAGATTTCAGGAAGTGGATATGGAATAGCTCAGTTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGTATATCTGATTTTTCTAAAACAATCCAAGTTTTTATGGTTCTCATGGTCTCAGCTAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATAAAGGGTGGTCGTGCCATGAGATCGGTCTTTGATCTTCTTGACCGAAGAACTGAGATTGAGCCAGATGATGCAGATGCTACTCCTGTTCCTGATCACCTTCGTGGTGAAGTAGAACTCAAACATGTTGATTTCTCTTATCCAACAAGACCAGACATGTCAGTTTTTCGCGACCTAAGCCTTCGTGCCAGGGCAGGTAAAACTCTTGCCCTTGTAGGGCCTAGTGGCTGTGGTAAGAGTTCAGTCATTGCCCTTGTACAAAGGTTCTATGATCCAACATCTGGGAGGGTCATGATTGATGGAAAGGACATAAGGAAATACAATCTGAAGTCTCTTAGAAGGCACATTGCTGTGGTGCCTCAGGAGCCGTGCCTATTTGCTACTACTATTTATGAGAACATTGCTTATGGACATGACTCAGCCACTGAAGCTGAGATCATAGAGGCTGCAACTCTTGCCAATGCTCACAAGTTCATATCTTCTCTGCCTGATGGATTCAAGACCTTTGTTGGTGAGAGGGGAGTTCAACTATCAGGGGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTTCAGGAGGCCTTGGACCGTGCCTGTGCTGGAAAAACCACCATCATTGTTGCACACAGGCTATCAACTATTAGGAATGCCAATCTGATTGCAGTGATGGATGATGGTAAGGTAGCAGAACAAGGCTCTCATTCACAGTTGTTAAAGAATCACCCTGATGGAATCTATGCACGCATGATTCAGCTGCAAAGGTTCACAAATAACCAAGTCATTGGAATGGCCACAGGATCAAGTTCTTCAGCAAGATCAAAAGATGATGAAAGAGAAGGCTAG | 4038 | 0.4525 | MSQNSEEIKTVEQWRWSEMQGLELMSSSAPVSDSHESNPTLEEKREERVMEEPSVAKKDAAASNGTCSSGGGGDKKGESISSVRFGELFRFADGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANDLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALDQDIQFFDTEVRTSDVVFAINSDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGETRALQAYSSALRTAQKIGYRTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRKSESGLQLESVTGLVELKNVNFSYPSRPEVMILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVMLDEHDVKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDADQDEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELFAKGENGVYAKLIRMQEMAHETSMTNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHANYRPEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIQEIEKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSERKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIQVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDADATPVPDHLRGEVELKHVDFSYPTRPDMSVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGFKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRACAGKTTIIVAHRLSTIRNANLIAVMDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNNQVIGMATGSSSSARSKDDEREG | 1345 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun7g00942 | 1345 | FunFam | ABC transporter B family member 1 | 735 | 1044 | - | - | |
Viun7g00942 | 1345 | PANTHER | ABC TRANSPORTER B FAMILY | 69 | 768 | IPR039421 | - | |
Viun7g00942 | 1345 | CDD | ABC_MTABC3_MDL1_MDL2 | 1079 | 1318 | - | - | |
Viun7g00942 | 1345 | Gene3D | - | 422 | 687 | IPR027417 | - | |
Viun7g00942 | 1345 | Gene3D | - | 1070 | 1326 | IPR027417 | - | |
Viun7g00942 | 1345 | CDD | ABC_MTABC3_MDL1_MDL2 | 424 | 663 | - | - | |
Viun7g00942 | 1345 | ProSitePatterns | ABC transporters family signature. | 1218 | 1232 | IPR017871 | GO:0005524|GO:0016887 | |
Viun7g00942 | 1345 | Gene3D | ABC transporter type 1, transmembrane domain | 147 | 1052 | IPR036640 | GO:0005524|GO:0016020 | |
Viun7g00942 | 1345 | MobiDBLite | consensus disorder prediction | 670 | 701 | - | - | |
Viun7g00942 | 1345 | SUPERFAMILY | ABC transporter transmembrane region | 743 | 1063 | IPR036640 | GO:0005524|GO:0016020 | |
Viun7g00942 | 1345 | SUPERFAMILY | ABC transporter transmembrane region | 88 | 405 | IPR036640 | GO:0005524|GO:0016020 | |
Viun7g00942 | 1345 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 415 | 663 | IPR027417 | - | |
Viun7g00942 | 1345 | Pfam | ABC transporter transmembrane region | 101 | 373 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun7g00942 | 1345 | Pfam | ABC transporter transmembrane region | 757 | 1026 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun7g00942 | 1345 | MobiDBLite | consensus disorder prediction | 24 | 77 | - | - | |
Viun7g00942 | 1345 | FunFam | ABC transporter B family member 19 | 1045 | 1067 | - | - | |
Viun7g00942 | 1345 | FunFam | ABC transporter B family member 1 | 414 | 664 | - | - | |
Viun7g00942 | 1345 | Pfam | ABC transporter | 1098 | 1246 | IPR003439 | GO:0005524 | |
Viun7g00942 | 1345 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1079 | 1315 | IPR003439 | GO:0005524 | |
Viun7g00942 | 1345 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 756 | 1043 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun7g00942 | 1345 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 745 | 1061 | - | - | |
Viun7g00942 | 1345 | FunFam | ABC transporter B family member 1 | 1069 | 1319 | - | - | |
Viun7g00942 | 1345 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 100 | 397 | - | - | |
Viun7g00942 | 1345 | Pfam | ABC transporter | 442 | 591 | IPR003439 | GO:0005524 | |
Viun7g00942 | 1345 | MobiDBLite | consensus disorder prediction | 37 | 55 | - | - | |
Viun7g00942 | 1345 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 424 | 660 | IPR003439 | GO:0005524 | |
Viun7g00942 | 1345 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1070 | 1318 | IPR027417 | - | |
Viun7g00942 | 1345 | FunFam | ABC transporter B family member 1 | 87 | 422 | - | - | |
Viun7g00942 | 1345 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 101 | 389 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Viun7g00942 | 1345 | SMART | AAA_5 | 1106 | 1299 | IPR003593 | GO:0016887 | |
Viun7g00942 | 1345 | SMART | AAA_5 | 451 | 637 | IPR003593 | GO:0016887 | |
Viun7g00942 | 1345 | ProSitePatterns | ABC transporters family signature. | 563 | 577 | IPR017871 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun7g00942 | Viun-Chr7 | 9160193 | 9166262 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun7g00942 | 75 | 1340 | Calmodulin-binding Proteins | AT2G36910 | 88.240 | 0.0 | 2302 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun7g00942 | K05658 | - | gmx:100777382 | 2392.85 |