Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00936 ATGGGAAGAGCTCCTTGTTGTGACAAGGCCAATGTAAAGAAAGGGCCATGGAGTCCTGAAGAAGATGAAAAGCTTAGAGAGTTCATAGAGAAACATGGTACAGGTGGAAACTGGATTTCCCTCCCACATAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTCAGATGGCTTAATTATCTGAGGCCAAACCTTAAGCATGGGGAGTTTTCTGAAGATGAAGATAGAATAATCTGTACTCTCTTTGGTAGCATTGGAAGCAGGTGGTCCATAATAGCATCTCAGTTGCCAGGCAGAACTGACAATGATATCAAGAACTACTGGAACACCAAGCTTAAGAAAAAAATGATGGGAATAGTGAACCCTTCAGCACTGAAAAAGCCTCACCAAGTTACCACCCTTTCATCCATGCTTCAAAACTCAACACCCTCATCATCCTCCTCCTCATCTTCATTATCACTAAAAAGCAATCACAGCTCAAACCATCAACCCCATGTGGCTTTCACAGGCTCTGAGACCATTTCATATGAAAGTCTTCTGAGTGGAAACTCTTGTTCTACTTTTGAGAACCTTTACCAAGTTAATTGTGGGTTTATGTTGGGGGGTGAAACAAGTTGCAGCTCTTCTTCAGATGGAAGCTGCAACAACAACAACAATAATCAGATGAATCATGTGAAAGGAGCAGAACTTGGATATGTTGGTGTTGGAGGTTTTGGTGACCAAATAGGTGGTCTCAGTTACCTATCTAGTGAGGTGGAAGATACTCAAAAGTTGGTGTGCTCCAATGGTGGTAGGACTAGTGGGTGGACAGGTGAAGAAAGTAAGTTATGGGGGGAAAGTCCATTAGAGTATGGTTTAGAAGAAATTAAACAGCTAATAAGCACAAGTAGTTGCAACAACTTTATGTTTGATGACAGCAAGACAGGGGAAATGGTCATGTACTACTGA 951 0.4185 MGRAPCCDKANVKKGPWSPEEDEKLREFIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNLKHGEFSEDEDRIICTLFGSIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMGIVNPSALKKPHQVTTLSSMLQNSTPSSSSSSSSLSLKSNHSSNHQPHVAFTGSETISYESLLSGNSCSTFENLYQVNCGFMLGGETSCSSSSDGSCNNNNNNQMNHVKGAELGYVGVGGFGDQIGGLSYLSSEVEDTQKLVCSNGGRTSGWTGEESKLWGESPLEYGLEEIKQLISTSSCNNFMFDDSKTGEMVMYY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00936 316 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Viun7g00936 316 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Viun7g00936 316 FunFam Transcription factor RAX3 7 68 - -
Viun7g00936 316 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Viun7g00936 316 SMART sant 13 64 IPR001005 -
Viun7g00936 316 SMART sant 67 115 IPR001005 -
Viun7g00936 316 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Viun7g00936 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Viun7g00936 316 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Viun7g00936 316 Gene3D - 7 68 - -
Viun7g00936 316 CDD SANT 16 62 IPR001005 -
Viun7g00936 316 PANTHER OS09G0431300 PROTEIN 1 234 - -
Viun7g00936 316 MobiDBLite consensus disorder prediction 131 167 - -
Viun7g00936 316 Gene3D - 70 143 - -
Viun7g00936 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00936 Viun-Chr7 9022661 9024757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00936 1 119 MYB Transcription Factor Family AT5G57620 84.034 2.02e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun7g00936 Myb_DNA-binding 7.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00936 K09422 - gmx:100820139 436.032