Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00928 ATGGAGATCACGAGCAGCAATAACAGCTGCAGCAGCATGATGTGGTTTTTCAAAAATAAAGGGTTTGATGACAACAGTGTGCAAGGAATTTTCCGACGGTGTAGGCGCCTTGAGGATGTGCATCAGGAAAGAGCGAGTGAGAATTGGGAGTATTTGAGAAGCATTGGCATTGAAGAAAGGAAGTTGCCCTCAATTGTTTCAAAATGCCCCAAGATTCTTGCACTGGATCTTTATGACAAGATTATGCCCACGGTTGAGTGTCTAAGGACTCTGGGAACAAAACCACGTGAGGTTGCTACTGCCATAGCCAAGTTCCCTCACATACTTTCAAACAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCCTTCTTTCAGTCTTTGGGTATCCCTGAAAAGCATATTGGGAAAATGATACTGCTCAATCCTAGGCTTATAAGCTACAGCATTGAAACAAAGTTGACTGAAATTGTGAACTTTCTTACTAGCCTTGGTCTCAATAAAGATGGAATGATTGGAAAAGTTATAGTCAAGGACCCCTATATTATGGGTTATAGTGTTGAGAAAAGACTCCGCCCTACTTCACAGTTCCTCAAGTCAATAGGTCTGAGTGAGCAGGATCTTCAAGCAGTGGCTATGAACTTCCCAGCAATCTTGAGTAGAGATGTGAACAAGCTTTTGGTACCCAATCATACGTATCTAATGAGACGAGGATTTCAAGACAGACAGATAGTTGCTTTGGTGGTTGGTTTTCCTCCAATCTTGATCAAGAGCATTCAGAATTCATTAGAACCAAGGTTCAAATTTTTAGTGGATGTCATGGGAAGACAAGTTGATGAAGTTGTTGATTATCCTAGTTTCTTTCATCATGGCCTCAAGAGAAGAATAGAGCCACGGTACAAACTTCTAAAGGAGAGGAATATAAATTGTAGCTTGAGTGAAATGTTGGATTGCAACAAGAAGAAGTTCTTCATGAAGTTTGGTTTGTTAGAAGGACAAGCCTTGAGTAACTAG 1011 0.4115 MEITSSNNSCSSMMWFFKNKGFDDNSVQGIFRRCRRLEDVHQERASENWEYLRSIGIEERKLPSIVSKCPKILALDLYDKIMPTVECLRTLGTKPREVATAIAKFPHILSNSVEEKLCPLLAFFQSLGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLTSLGLNKDGMIGKVIVKDPYIMGYSVEKRLRPTSQFLKSIGLSEQDLQAVAMNFPAILSRDVNKLLVPNHTYLMRRGFQDRQIVALVVGFPPILIKSIQNSLEPRFKFLVDVMGRQVDEVVDYPSFFHHGLKRRIEPRYKLLKERNINCSLSEMLDCNKKKFFMKFGLLEGQALSN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00928 336 Gene3D Transcription termination factor 3, mitochondrial 98 330 IPR038538 -
Viun7g00928 336 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 98 330 - -
Viun7g00928 336 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 Pfam mTERF 98 322 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 Pfam mTERF 6 168 IPR003690 GO:0003690|GO:0006355
Viun7g00928 336 PANTHER CGI-12 PROTEIN-RELATED 12 142 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun7g00928 mTERF 4.3e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00928 K15032 - gmx:100816929 603.594