Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00917 ATGAGAGAGATGATTACATTCATGGACTCAAAGGAGAAATCGAAGGAGGCGGAGAGGTGTTTGGATCCTCAGCTATGGCATGCGTGTGCGGGTGGCATGGTGCAGATGCCAGCAGTGAACAGCAAGGTGTATTACTTCCCTCAGGGCCATGCTGAACATGCATGCGGAGCGGTTAACTTCAGGACCTGTCCCAAGGTTCCGCCTTTGGTTCCATGCAGAGTGGCTGCCATCAAGTACATGGCTGATCCTGACACCGACGAGGTGTATGCAAAACTCAGGCTTGCTCCTCTGACCGTCAATGATGCTGATTACGACCGTGATGTTGTTGGACCCGAAACTCAGGACAAGCCTGCTTCATTTGCGAAAACCTTGACCCAATCCGATGCCAACAATGGCGGGGGGTTTTCTGTTCCGAGGTACTGTGCGGAGACGATTTTCCCGAGACTAGATTACTCGGCTGATCCTCCTGTTCAGAACATCCTCGCCAAGGATGTTCACGGGGAAACATGGAAATTCAGACACATCTACAGGGGCACGCCCAGGCGGCATCTGTTGACAACTGGATGGAGTACTTTTGTGAATCACAAGAAGCTTGTTGCAGGAGACTCGATTGTGTTTTTGAGGGCAGAAAACGGGGATCTCTGTGTCGGGATTCGGCGAGCCAAGAAGGGGATTGGTGGGGGACTCGAGGGCTCCTCTGGCTGGAACCCTACAGGAGGAAGCTGTCCTATGCCCTATGCTGGATTTTCACCTTTTCTCAGGGAGGACGACAACAGAATCCTCAGAAATGGTAACACCAATGGGTTGAACCCCAGTGTGAGTATGACGGGCAGGGGCAAAGTCAGACCAGAAGCTGTTGTTGAAGCTGCAAATCTCGCCGCCAATAAACAACCATTTGAGGTTGTCTACTACCCTCGGGCAAGTACTCCTGAATTTTGCGTCAAGGCCCCACTGGTAGAAGCAGCACTGCAGATTCGATGGTGCTCTGGTATAAGATTCAAGATGGCCTTCGAAACCGAGGACTCCTCACGGATAAGTTGGTTCATGGGAACCATATCTTCGGTTCAGGTTTCCGATCCCCTTAACTGGCCTAACTCACCTTGGAGACTTCTCCAGGTGACATGGGATGAACCGGATTTACTTCAAAACGTGAGAAGGGTGAGTCCATGGCTCGTTGAATTGGTGTCAAACATGCCTGCCATTCATCTTTCACCATTCTCACCACCAAGGAAGAAATTGAGATTGGCTCAACACCCAGATTTCCCCCTTGAGGGGCAGATTCCTCTGCCAACATTTTCCGGCAATCTTCTTGGTCCCAGCAACACCAACCAGTTTGGTTGTGCACCCGAAAGTACTCCTGCTGGCATGCAGGGAGCCAGGCATGGTCACTATGGTCTTCCCATATCGGATCTCCAGTTCAGCAAACTACATCCAGGTCTATTTCCTGCTGGTTTCCCTCCTCTTGATCACGCTGCTACGCCGCCAATGAGAATCTCTAATAACCAGCCGCCATTGCAGAAGCCCAGCATGAGTGAGAACGTCTCTTGCTTATTGTCTATGGCAAATTCTACTCCATCTTCCAAGAAAACGGATGAGGGGAAGACACCCCAGCTCGTGCTTTTCGGCCAGAGAATTCTCACCGAGCAGCAGATATCTCTCAGCAGCTCCGTTGACACATTCTCCCCAGTTCTTACCAAAAATTGTTGCTCCGATGGACACGCAGATAAAGCGCCTAATGTTTCTGATTGTTCTGGATCGGCTCTTCATCAGCAGCAAGGCCAACAGGAACAACAACGTTCCTCTTGTGAGAGGTTTCAATGGTACAAAGATAACCCTCAAGAAACTGAGACCGGTCATTGCAAAGTTTTCATGGAGTCAGAAGATGTAGGCAGGACTATGGACCTCTCGTCGCTTCGGTCCTATGATGAACTCTACAGAAGGCTAGCAGACATGTTTGGCATAGAAAAATCTGAGATGTTAAGTCAGGTGCTCTATCGCGATTCTAATGGAGCTGTCAAACACATTGGTGATGAACCATTGAGTGACTTCAAAAAATCAGCCAGGAGGTTGACTATTCTAACGGATTCTGGCAGCAACAATGTAGGAGTGTAG 2112 0.4981 MREMITFMDSKEKSKEAERCLDPQLWHACAGGMVQMPAVNSKVYYFPQGHAEHACGAVNFRTCPKVPPLVPCRVAAIKYMADPDTDEVYAKLRLAPLTVNDADYDRDVVGPETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLEGSSGWNPTGGSCPMPYAGFSPFLREDDNRILRNGNTNGLNPSVSMTGRGKVRPEAVVEAANLAANKQPFEVVYYPRASTPEFCVKAPLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSVQVSDPLNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHLSPFSPPRKKLRLAQHPDFPLEGQIPLPTFSGNLLGPSNTNQFGCAPESTPAGMQGARHGHYGLPISDLQFSKLHPGLFPAGFPPLDHAATPPMRISNNQPPLQKPSMSENVSCLLSMANSTPSSKKTDEGKTPQLVLFGQRILTEQQISLSSSVDTFSPVLTKNCCSDGHADKAPNVSDCSGSALHQQQGQQEQQRSSCERFQWYKDNPQETETGHCKVFMESEDVGRTMDLSSLRSYDELYRRLADMFGIEKSEMLSQVLYRDSNGAVKHIGDEPLSDFKKSARRLTILTDSGSNNVGV 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00917 703 Pfam Auxin response factor 289 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Viun7g00917 703 MobiDBLite consensus disorder prediction 491 510 - -
Viun7g00917 703 Gene3D - 118 222 IPR015300 -
Viun7g00917 703 SMART B3_2 120 222 IPR003340 GO:0003677
Viun7g00917 703 FunFam Auxin response factor 327 400 - -
Viun7g00917 703 CDD B3_DNA 119 220 IPR003340 GO:0003677
Viun7g00917 703 Gene3D - 613 701 - -
Viun7g00917 703 FunFam Auxin response factor 118 222 - -
Viun7g00917 703 SUPERFAMILY DNA-binding pseudobarrel domain 113 221 IPR015300 -
Viun7g00917 703 Gene3D - 326 400 - -
Viun7g00917 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 696 IPR044835 GO:0003677|GO:0006355|GO:0009725
Viun7g00917 703 MobiDBLite consensus disorder prediction 583 600 - -
Viun7g00917 703 MobiDBLite consensus disorder prediction 580 600 - -
Viun7g00917 703 ProSiteProfiles PB1 domain profile. 617 697 IPR000270 GO:0005515
Viun7g00917 703 ProSiteProfiles B3 DNA-binding domain profile. 120 222 IPR003340 GO:0003677
Viun7g00917 703 MobiDBLite consensus disorder prediction 495 510 - -
Viun7g00917 703 Pfam B3 DNA binding domain 120 221 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00917 Viun-Chr7 8744688 8748462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00917 18 703 B3 DNA Binding Superfamily AT4G30080 57.450 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Viun7g00917 B3 3.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00917 - - gmx:100796522 1178.7