Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00910 ATGCAAAATCTCCCTACCCTTTCTCTCATTTTCTTGTTCTTCTGTGCCACTGCACATGGGTTCGGCGCCATGGGGCCAATATCTGCTTCATTCGCAAAAGATGAGGTTTTCTGCGCCATTGATGCTAGCGGGAAGCAAGACGTCATTTGCTGGGGGAACAACGCCACGTCACCGTCTCTGTCCTCCGTTACAAACGCCGTTCCTTCCATGTCAGCACTCTCCGGCGGGGAAGGCTTTCTATGCGGCATTTTAGCGAACACCTCGCAAGCCTTCTGCTGGGGTGCTGTGACTAAACCCAGCGCAGATCTCGTCCTCGTGCCGCCGGCGTACCGGAACACGGCTTATTCCCACATCGCGGCTGGCAAGAGTCACGTTTGCGCCGTTCGAGGATCCTACTACGCCGATCACGATTCGGGCTCCGTGGATTGCTGGGAAATCACGACGACCGCAAACAAAACGTTGACAGCGAAACAGAGTGATTTGTATTTCAACCAAGCCGTGATGAATCTGGAGGTGAAGAGGGTTGTTTCCGGGGAAGGGTTCACCTGTGGTGAGGTCAGAGACGGTGGACTCATATGTTGGGGACCTAACTCTGGAGGGATAATAGTTTCCAATGTTTCCGACAGTTTCGCGGTTTTAGCGGCGGGTCGGAGGGCCGTGTGTGGTGTTTTCAACGTTTCCGGCGAGTTAAAATGCTGGGGCGACCCGGGTTCGTATTCGGATCCTCCATTGGATTCGATTCGGCTGGTGTCTCTTACTGCTGGGGCTAACCATTTCTGCGGCATTAGAATGGATAACCATGAAGTGGAGTGTTGGGGTGATTTGAACTCTTCGGTGATTCCTCGAGGGAACGGTTTCATGGCAATTGCTTCTTCGGATTTCACCACGTGTGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGATGGTGAATGCTTTGAAACCCGATTTTGATCCTCCTTTGGAGCTTTCGAGCCCTGGACTGTGCAGGGCTAGTTCTTGTGGGGTCGGTGAGTTTGCTTTTAATGCGAGTATGCTTAACGAGCTAGCTTTGACTAGCCTCTGTGTTAGAGAAGATTTGAGGATTTGTTCGCCTTGTGGCTCAAATTGTTCTAAAGGGTTCTTCTTGTCAAGTTCATGTACTAAAAATGCTGATAGGGTCTGCACTTCGTGTTCTCTTTGTCAGAACAGCTCTTGTTTTAGTGTCTGTGGACTTCACTCCCCAACGGGTCTGCATATGCACTGGCACTGGCATCATTTGCGTAAATGGATGGTTATAGTTGGGTGCTCCGTGTTGGGGGTTTTGACAATTTTGCTTTGTGGGTGTCTTTTTTCGGTCAGAAAGAGGACAAAGAAACAATCCAAGTCAGGCATGGGGAAACCAGAGCAAGAGGATGACCATGTCAATGTTGCTCTTCAATCAACACCTTCTGTTAATTCTTGTCCCGGGGCGCCTCAGGTTTTCAGGCTTTCTGAACTGAAGGATGCTACCAATGGGTTTAAGGAGTTTAATGAACTTGGGAGAGGAAGTTATGGGTTTGTGTACAAAGCCATGTTGGGAGATGGGAGAGTGGTTGCTGTTAAAAGAGCAAATGCTGCTACCATAATCCACACCAATAATCGTAATTTTGAAATGGAACTAGAAATTCTCTGCAAAATTCGCCATTGTAATATCGTTAATCTGTTGGGGTACTGCGCGGAGATGGGGGAGAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACGCTTTATGATCACCTCCATGGCGGTCTTTCTCCGCTTAATTGGAGCCTGAGGTTGAAGATAGCGATGCAAGCTGCGAAGGGGCTTGAGTATCTTCACAAGGAACTTGTGCCTCCAATTGTGCATAAGGATCTAAAAAGTTCGAACATTCTTTTGGATTCGGAGTGGGGGGCAAGGATTTCGGACTTTGGACTTCTTGCTTCGAGTGACAAAGATCTGAATGGAGACTTAGAAAGCGATGTTTACGATTTTGGGATTGTGATGTTAGAGATTCTGAGTGGAAGAAAGGCTTATGACAGGGATTACACTCCACCCAACATGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAGGCTGCTGCTACAATTGATAGGTACGTGGCTCTTCCAAGAAATGTTGAACCTTTGCTTAAGCTTGCTGATATAGCAGAACTTGCAGTGAGAAAGAATCCAAGTGAACGACCACCTATGTCAGATATTGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAG 2274 0.4798 MQNLPTLSLIFLFFCATAHGFGAMGPISASFAKDEVFCAIDASGKQDVICWGNNATSPSLSSVTNAVPSMSALSGGEGFLCGILANTSQAFCWGAVTKPSADLVLVPPAYRNTAYSHIAAGKSHVCAVRGSYYADHDSGSVDCWEITTTANKTLTAKQSDLYFNQAVMNLEVKRVVSGEGFTCGEVRDGGLICWGPNSGGIIVSNVSDSFAVLAAGRRAVCGVFNVSGELKCWGDPGSYSDPPLDSIRLVSLTAGANHFCGIRMDNHEVECWGDLNSSVIPRGNGFMAIASSDFTTCGIREDDLLLDCWMVNALKPDFDPPLELSSPGLCRASSCGVGEFAFNASMLNELALTSLCVREDLRICSPCGSNCSKGFFLSSSCTKNADRVCTSCSLCQNSSCFSVCGLHSPTGLHMHWHWHHLRKWMVIVGCSVLGVLTILLCGCLFSVRKRTKKQSKSGMGKPEQEDDHVNVALQSTPSVNSCPGAPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAMLGDGRVVAVKRANAATIIHTNNRNFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYDFGIVMLEILSGRKAYDRDYTPPNMVEWAVPLIKQGKAAATIDRYVALPRNVEPLLKLADIAELAVRKNPSERPPMSDIASWLEQIVKDGLIL 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00910 757 Gene3D - 160 338 IPR009091 -
Viun7g00910 757 FunFam Serine/threonine-protein kinase-like protein CCR1 579 655 - -
Viun7g00910 757 FunFam Serine/threonine-protein kinase-like protein CCR1 656 754 - -
Viun7g00910 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Viun7g00910 757 SUPERFAMILY Protein kinase-like (PK-like) 477 748 IPR011009 -
Viun7g00910 757 FunFam serine/threonine-protein kinase-like protein CCR1 470 578 - -
Viun7g00910 757 Pfam Protein kinase domain 501 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00910 757 Gene3D Phosphorylase Kinase; domain 1 465 578 - -
Viun7g00910 757 SMART serkin_6 501 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00910 757 Gene3D - 22 159 IPR009091 -
Viun7g00910 757 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 334 389 IPR001368 GO:0005515
Viun7g00910 757 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 7 751 - -
Viun7g00910 757 SUPERFAMILY RCC1/BLIP-II 26 278 IPR009091 -
Viun7g00910 757 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Viun7g00910 757 Gene3D Transferase(Phosphotransferase) domain 1 656 754 - -
Viun7g00910 757 Gene3D Transferase(Phosphotransferase) domain 1 579 655 - -
Viun7g00910 757 ProSiteProfiles Protein kinase domain profile. 501 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00910 Viun-Chr7 8582845 8585635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00910 9 749 Receptor kinase-like Gene Family AT3G59420 29.901 1.18e-106 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Viun7g00910 Pkinase 2.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00910 - - gmx:100802259 1392.1