Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00909 ATGAACCGTGTATTCTCAATTTACCCAAACATGGTCTTTCTCATTTTCTCCACACGCTGTTCCTCTTCTCCAAAACCAAAACCTTCATATATAACCCCAAACCCCAACATCCAAGGGACTGATACACTTATCCCAAGACAAGACATGAAGATTCCTTTTTTCACTTGTTTCTCTTCACCCACCAGAAAACAAAACAAAAACGACTACCCAGAGGAAGAGATCAACGACGGGAGCTTCCGTTTGTTCACCTACGGCCAATTGAAATTGGCCACGCGAAATTTCCATTCCTCGGAGAAGGTCGGAGAAGGTGGCTTCGGCTCTGTCTATAAGGGGAAGCTTCTTGATGGTTCTCTTGTGGCGGTGAAGGTGCTTTCGGTTGAGGTGGAATCCATGCGAGGAGAGAGGGAATTTGTGGCGGAATTGGCTACACTTGCAAACATCAAGCACCAAAATCTTGTAAGCTTGAAAGGGTGTTGTGTGGAAGGTGTTCATAGGTATTTGGTGTATGATTATATGGAGAACAATAGCCTCTACAAAACCTTCTTAGGTTCTGAGGAGAGAAGAATGAGATTCACCTGGGAAACAAGGAGGGAAGTATCCATAGGAGTGGCTCGGGGACTTGACTTTCTCCACGAAGAGCTTAAGCCTCATATCGTACACAGAGACATCAAAGCCAAAAATATTCTTCTCGATCAGAATTTCACTCCAAAGGTTTCGGATTTCGGTTTGGCAAAATTGCTGAGAGACGAAGCTTCTTACATCAGCACTCGTGTTGCAGGGACATTGGGTTATCTAGCTCCAGAGTATGCCAATTCTGGACAGGTTTCACGAAAATCAGATGTTTACAGCTTCGGAGTGTTACTTCTGCAAATCGTGAGTGGCCTTGCAGTGGTGGATGCCTATCAAGACATTGAACGTTTCATAGTGGAGAAGGCGTGGGCAGCGTATCAATCGAACGATCTGTTAAAACTGGTGGATCCCATGTTGAACAAGAATTTTCCCGAGGAAGAGGCCATAAAGTTCTTGAAGGTGGGGCTACTGTGTGTGCAAGAAACAGCGAAGCTTCGGCCACGAATGTCAGAGGTGGTGGAAAAATTCACCAACAACGTTGATATGAAAGATGTTAAGATTTCGAAACCAGGGTTCGTTGCTGATCTGAGGAACATCAGAATCAAAAACCAAAACACTTCGTCCCCGGAAACAAGTTCTGCCGGAGCAACCTTCGCAAGCTCCATTTGGAGTTCAGCCAATCTTGCTCGTTAG 1263 0.4521 MNRVFSIYPNMVFLIFSTRCSSSPKPKPSYITPNPNIQGTDTLIPRQDMKIPFFTCFSSPTRKQNKNDYPEEEINDGSFRLFTYGQLKLATRNFHSSEKVGEGGFGSVYKGKLLDGSLVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGVHRYLVYDYMENNSLYKTFLGSEERRMRFTWETRREVSIGVARGLDFLHEELKPHIVHRDIKAKNILLDQNFTPKVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQDIERFIVEKAWAAYQSNDLLKLVDPMLNKNFPEEEAIKFLKVGLLCVQETAKLRPRMSEVVEKFTNNVDMKDVKISKPGFVADLRNIRIKNQNTSSPETSSAGATFASSIWSSANLAR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00909 420 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 76 401 - -
Viun7g00909 420 FunFam Serine/threonine-protein kinase receptor 63 171 - -
Viun7g00909 420 Gene3D Phosphorylase Kinase; domain 1 56 171 - -
Viun7g00909 420 SMART serkin_6 94 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00909 420 CDD STKc_IRAK 100 368 - -
Viun7g00909 420 FunFam Putative LRR receptor-like serine/threonine-protein kinase 172 378 - -
Viun7g00909 420 Pfam Protein kinase domain 94 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00909 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Viun7g00909 420 Gene3D Transferase(Phosphotransferase) domain 1 172 380 - -
Viun7g00909 420 SUPERFAMILY Protein kinase-like (PK-like) 78 385 IPR011009 -
Viun7g00909 420 ProSitePatterns Protein kinases ATP-binding region signature. 100 122 IPR017441 GO:0005524
Viun7g00909 420 ProSiteProfiles Protein kinase domain profile. 94 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00909 Viun-Chr7 8537173 8539421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00909 62 406 Receptor kinase-like Gene Family AT1G07650 44.932 4.30e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g00909 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00909 - - gmx:100801728 658.677