Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00900 ATGAGTGTCATCGAAATTCTCACCAGAGTCGATTCCATTTGCAAGAAGTACGACAAATACGACGTCGAGAAGCACCGCGATGCTAATGTCGCTGGCGATGATGCCTTTGCCAGACTCTACGCCTCCGTCGACGCTGACATCGAGGCATTGCTTCAGAAAGCAGAAACGGCTTCCAAGGAGAAAGGTAAGGCATCTGCTGTAGCGATCAATGCGGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTTCCCAAGTTGCAGAGACTGGCTGTGAAAAAGGTCAAGGGTTTATCTTCACAAGAATTTGCTGCCCGTAACGATTTGGCTCTTTCATTGCCAGATAGAATCCAAGCCATCCCAGATGGGTCTCCTCCTGTGCCAAAACAATCCGGAGGCTGGGCTTCTTCTGCCTCACGTCCTGAAATTAAGTTTGATTCAGATGGGCAATTTGATGATGATTACTTTCAACAGTCTGAGCAATCAAGCCAATTCAGGCAAGAATATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATTGCTGAAGGATTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAACTGGATCGACAAGTTCCTCTCATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACAAATGTCAGACTTAAACACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTACTTATACAACGTACTAAAGAAATGA 798 0.4449 MSVIEILTRVDSICKKYDKYDVEKHRDANVAGDDAFARLYASVDADIEALLQKAETASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLALSLPDRIQAIPDGSPPVPKQSGGWASSASRPEIKFDSDGQFDDDYFQQSEQSSQFRQEYEMRRMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00900 265 MobiDBLite consensus disorder prediction 121 143 - -
Viun7g00900 265 SMART tSNARE_6 165 232 IPR000727 -
Viun7g00900 265 Pfam SNARE domain 207 256 IPR000727 -
Viun7g00900 265 Gene3D - 170 231 - -
Viun7g00900 265 PANTHER SYNTAXIN 46 252 IPR045242 -
Viun7g00900 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Viun7g00900 265 CDD SNARE_Qc 175 231 - -
Viun7g00900 265 FunFam Putative syntaxin-71-like 170 231 - -
Viun7g00900 265 Coils Coil 40 60 - -
Viun7g00900 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Viun7g00900 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00900 Viun-Chr7 8394978 8399487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00900 1 264 SNARE and Associated Proteins AT3G09740 76.316 1.69e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00900 K08506 - gmx:100819272 461.455