Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00882 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTAGAAGCAAGGGACGACCTAAATACAGACAAAGCTGCCGGGATATATCAGTCCAATTCTGGATATAGCTTGGATGAGAAAAATCGGAAGCATCCTGTGCTGAAACTGGGATATAAGGATAATCTAGATGATGATATAAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTCTGGCCTTTTACAGGATGGTACAAGCCCTAGGATGAAAAGTTCATTGAAAAAACCAATTACAGTGGGTGCTCCTCGGTCCCCACGAGTTGGATATTCTGAGCCTTTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCAAGAATATCTGAGGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGTTGAAGGTAGACAATCTGGGCCTTCTAATGTTGAGAGTAAAGGGAGTACAAGTGAAATATCTCTAGTGCCAGAAGACAGCAGCTCACATGCCTTGGATAAAGCTTCCCAGTCTCATCCAACTGTTAAAAGCACATCACTAAGCAAAAATGTCCAATCTTCCAAAATTGCTGTTGCAACTACTGAAAATGGTACCGGGGCTTCATTGATAGGTGACTTGGCTAGTTCATCAAATAAAGTTGGGGTTCTATCGCAGTCTTTGGAACCTTCTCAAATAGAGAAACAAACATCTGCATCTTCTCCATCTAGTTGTAACACTAATGGAAGTAAGTTAGACTTTTCTGAAAATGCTTCTTCCTCTAATAAATTAGGAAATAAAACATCTGTATCAAAGAATGGGCAAAAAGATAGGTTACAAACAGTCTGTTCCTCATCTACTTCAGTAAATGGCAGCAGAGTGTGCAAACTGTCACGACATGCCCCTCGTACGGTCAAATCAATTATCAAGAACAAAAATTTGGGTAAGAAAAAACTAAAGCAGGATTCCTTTTCTGCTTTATTTGATCCCACATCCAATGAGGTAAATAACACGTCAGTTACTAGTTCAACTCAACTTGTTTGTGAGAGATGCTGGTGTGCTATAGAAAACAACAAAGGTATTGTATCATTGGACTCTACTAGTTCTGGAGATGGAATAAACTCTGTTAATGTGCAAGGCTCAGCACCAGCCGGCTGTAATAGCGTCAGAGAAGTTACAAAAGTGAAAAAGAATACCGTATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGACTACAGTAGTAGTACAAGTACAAGTGATGAGAGTAATCTCAGTGGGGCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGGAGGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAGGAAGTTAGGTTGTGGAGACATTGGAACTGTTTATCTTGCTGAGCTAATTGGCAAAAGTTGTTTGTTTGCTATCAAGGTGATGGACAATGAATTTTTGGAAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGATCATCCTTTTCTTCCGACACTGTATGGGCAGTTTACCTCAGATAATTTATCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAACAGCTTGGTAGAAGTTTTTCAGAGCCAGCAGCTAGGTTTTATGTAGCTGAAGTCCTTCTTGCTTTAGAGTACTTGCACATGCTGGGAGTGGTTTACCGTGATTTGAAGCCAGAAAACATTCTTGTTCGAGAAGATGGTCACATTATGCTGACAGATTTTGATCTGTCACTTAAGTGCGATGTTAGCCCAACGCTTCTGAAGTCATCTGATGTGGATCCTGCTAAGAATTCTGGTCCTTGTGCACAATCTAATTGCATTGAGCCATTTTGTATTGAACCATCCTGTCAAGTTCCATGCTTCAGCCCCAGACTCCTACCTCCTGCCGCAAAAACAAGGAAATTAAAAACAGATCTTGCTGCCCATCTCAGATCATTGCCACAGCTCGTGGCAGAACCCACTGACGCAAGATCAAATTCATTTGTTGGTACACATGAATACTTGGCGCCTGAGATAATCAAAGGAGAGGGACACGGAGCTGCAGTCGACTGGTGGACATTTGGTGTTTTTCTATATGAGCTCTTATATGGAAGAACACCCTTTAAAGGTTGTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGATACCCCATTTGTTAGTTTCCAAGCGAGGGATCTCATTAGGGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTACAGAGAAAGGGGCTGCTGAGATAAAACAACACCCCTTCTTTGAAGGCCTTAATTGGGCCTTAATTCGTTGCGCTATCCCACCAGAACTTCCAGACTTATGTGAATTTGGAGTTTCAGAGATGACTCCACAGTCCCAGTGCAAGGGTGTTCAGTATGTAGAGTGTAATGCAGCAGGAGAGCAAGTGGAATTTGAGTTGTTTTAA 2586 0.4134 MGSFSGTCEIVEARDDLNTDKAAGIYQSNSGYSLDEKNRKHPVLKLGYKDNLDDDINKLFESITLKSSSRDSGLLQDGTSPRMKSSLKKPITVGAPRSPRVGYSEPLTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVVEGRQSGPSNVESKGSTSEISLVPEDSSSHALDKASQSHPTVKSTSLSKNVQSSKIAVATTENGTGASLIGDLASSSNKVGVLSQSLEPSQIEKQTSASSPSSCNTNGSKLDFSENASSSNKLGNKTSVSKNGQKDRLQTVCSSSTSVNGSRVCKLSRHAPRTVKSIIKNKNLGKKKLKQDSFSALFDPTSNEVNNTSVTSSTQLVCERCWCAIENNKGIVSLDSTSSGDGINSVNVQGSAPAGCNSVREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGASCGNRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLRKLGCGDIGTVYLAELIGKSCLFAIKVMDNEFLERRKKMPRAQTEREILRMLDHPFLPTLYGQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLKCDVSPTLLKSSDVDPAKNSGPCAQSNCIEPFCIEPSCQVPCFSPRLLPPAAKTRKLKTDLAAHLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQGLRFPDTPFVSFQARDLIRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFGVSEMTPQSQCKGVQYVECNAAGEQVEFELF 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00882 861 PANTHER FLIPPASE KINASE 1-RELATED 230 830 - -
Viun7g00882 861 Gene3D Phosphorylase Kinase; domain 1 475 556 - -
Viun7g00882 861 FunFam serine/threonine-protein kinase D6PK-like 703 826 - -
Viun7g00882 861 MobiDBLite consensus disorder prediction 418 449 - -
Viun7g00882 861 MobiDBLite consensus disorder prediction 70 86 - -
Viun7g00882 861 SUPERFAMILY Protein kinase-like (PK-like) 455 827 IPR011009 -
Viun7g00882 861 Gene3D Transferase(Phosphotransferase) domain 1 701 823 - -
Viun7g00882 861 MobiDBLite consensus disorder prediction 70 99 - -
Viun7g00882 861 Gene3D Transferase(Phosphotransferase) domain 1 557 626 - -
Viun7g00882 861 MobiDBLite consensus disorder prediction 418 448 - -
Viun7g00882 861 MobiDBLite consensus disorder prediction 157 206 - -
Viun7g00882 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Viun7g00882 861 MobiDBLite consensus disorder prediction 237 296 - -
Viun7g00882 861 CDD STKc_phototropin_like 475 827 - -
Viun7g00882 861 FunFam Serine/threonine-protein kinase D6PK-like 475 560 - -
Viun7g00882 861 SMART serkin_6 477 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00882 861 ProSiteProfiles Protein kinase domain profile. 477 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00882 861 FunFam serine/threonine-protein kinase D6PK-like 561 628 - -
Viun7g00882 861 Pfam Protein kinase domain 705 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00882 861 Pfam Protein kinase domain 478 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00882 Viun-Chr7 8265468 8272346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00882 1 861 AGC Kinase Gene Family AT2G36350 51.455 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun7g00882 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00882 - K08286 gmx:100813470 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00882 7 8265468 8272346 Viun1g02502 1 35397436 35402600 ECH
Viun7g00882 7 8265468 8272346 Viun7g00882 7 8265468 8272346 ECH
Viun1g02502 1 35397436 35402600 Viun7g00882 7 8265468 8272346 PCT