Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00879 ATGGCGGAGAAGCACTTGCGGGAGCTACTTCTGGAGGACCAAGAGCCATTCCTCCTCAAACACTACATTTCAGAACGACGTAGCCTCCTCAAAACAGCTTCCCCAAACACCACCTTAACCAAAAACACCTCAAACTCAAACTCAAACTTCCCACTTAACAAATGCCTCCTCTCCTTCCACAACGCTACCAAATCTCCACTCTCGGAATTCGCGCCACCCACCAAGAACCACACCCCCCTCAGGCCCTCCAACGCCAAAACCGCCACACTCCTCCTTGAAGCCGCCCTCAGAATCCACAAGCACACCAAACCCAAGCCCAACAGGGCCTTCGGCATCTTCGGCTCGCTCTTCAAGAAACTCAGGACCCAGCGGAAGAGGGGACAGATAAACGATGATGTCGTTGCTGCCGTTGGGGTGGTGGGATCCTGTGAGGGCAGACCCAGCAGTAGTGGCGTGTGGTCGGAGAGCAACGAGGACAAGTCTTTGGACATGGAAACTTGTAGCAGTGCCCACTCCTTCGATGACTCCGTCGAACAAGAGATTCAGTTCCTCAACACTCGCAAACTCAACTCTCATGATCTCTTCTTCTGCCAAACCCCTTTCCGTTTCTCGCTCCGCCACAGCCCCGACTACTCCCCCCGCCGCACTCCGGAATTCTCTTCGCCGCTCGCCTCTCCCCGTCGCCACACCACTCAGGACAACAAAGTTAGTAGTGGTGATGGCGTCAACAAATTCCAACCTGGGAAAGAAGAGGAAGAAGAAGATAAAGAACAATGCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGACGACGATGATGCCTTTGATTTGGACTGTAGCTATGCCAATGTTCAAAGAACTACGCAGAATCTACTAGACAGGCTTCGTAGATTTGAGAAGCTTGCGGAGCTAGATCCGGTGGAGCTTGAGAAGAGGATGTTGGAGCAAGAAGATGAAACATTTATGGAAGAGGATGATGAAAAAAAGGTTGTCGGGGAAAGTGTGGTCGAAATCCTGAGTGATTCGCAGGAAGCAGGTGAGGACCTTAAGAGGCTGGTTTATGATCTGATAATGGAGGAAGAGACAGGAGTGAATTGCTCAGAAGAAAGGAACACAGTGGTGATGAGAAGGGTTTGCAGGAGGTTGGAGTTATGGAAGGAAGTGGAGTGCAACACCATTGATATGATGATTGAAGAGGATTTCTGCAGAGAAGAAGGTAGGTGGAAGAAAAATGGTGAGCACAGAGGGGAGCTAGTTCAGGAAGTTGAGTTTGCAATCTTTTGCTATCTAATGGAAGAACTTTCAGAGGAACTAGTATGTTGTTAG 1326 0.5 MAEKHLRELLLEDQEPFLLKHYISERRSLLKTASPNTTLTKNTSNSNSNFPLNKCLLSFHNATKSPLSEFAPPTKNHTPLRPSNAKTATLLLEAALRIHKHTKPKPNRAFGIFGSLFKKLRTQRKRGQINDDVVAAVGVVGSCEGRPSSSGVWSESNEDKSLDMETCSSAHSFDDSVEQEIQFLNTRKLNSHDLFFCQTPFRFSLRHSPDYSPRRTPEFSSPLASPRRHTTQDNKVSSGDGVNKFQPGKEEEEEDKEQCSPVSVLDPPFDDDDAFDLDCSYANVQRTTQNLLDRLRRFEKLAELDPVELEKRMLEQEDETFMEEDDEKKVVGESVVEILSDSQEAGEDLKRLVYDLIMEEETGVNCSEERNTVVMRRVCRRLELWKEVECNTIDMMIEEDFCREEGRWKKNGEHRGELVQEVEFAIFCYLMEELSEELVCC 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00879 441 PANTHER OS04G0572500 PROTEIN 1 438 - -
Viun7g00879 441 MobiDBLite consensus disorder prediction 245 260 - -
Viun7g00879 441 MobiDBLite consensus disorder prediction 214 241 - -
Viun7g00879 441 MobiDBLite consensus disorder prediction 207 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00879 Viun-Chr7 8217177 8221029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00879 3 439 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 32.704 2.68e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00879 - - vun:114192820 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00879 7 8217177 8221029 Viun7g00879 7 8217177 8221029 ECH
Viun1g02492 1 35269328 35272539 Viun7g00879 7 8217177 8221029 PCT