Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00875 ATGGAAATGGAAGATCACCATCACCACCACCGCCATCACCATCATCACCATCACCATCATCAGCAGCAGCAGAATCACCATCATCAGCAGCATCAACATCAACACCACTTTGCCGTCAACGATCTCAGGCAAGTCGTCAATGCCCCGAGGACCTCCCACAACACCTTCCCCTCCATGCCGCCGCACCCGACGGCCGAGCTTTTCCCGGGCCACCGGAATCTCGCACCCTTGCCCACTCCCCAACACCACCAACAACACTACGAGGTTATGATGTTCGGTCGTGACATAATGCCACCTAGCCTTCACGACTTCACTTCCACACCCCATGATCCTGCTGCTGCTGCTGCAGCAGCAGCACCCACCATGGCTCTACCCACTCCACCTGCCTTTGATGCCGAGGGTGCAGCTTGCATCGCTGGGGACCCCTCCACTGGAAGATGGCCCAGACAAGAGACCCTCACTCTCCTTGAGATCAGATCTCGCTTGGACCCTAAATTCAAAGAGGCTAACCACAAAGGACCCTTATGGGATGAAGTCTCTAGGATCATGTCCGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACAAAAGATGGCAAGGCGGGGAGACATGACGGGAAGCATTACAGATTCTTTCGTCAACTTGAGGCCTTGTATGGAGAAAACAGTAGCACAGTTTCAGTCCCAGAAACCAATGTTGTTGGCAGCATTCATTTTCAAGCAAGCAGCCATGACCCCTCCCAGACAAATCAAGATAAGTTTCAGTCTCACAATGGCAAGCATTGTGATAGCCTAAGCCTCACCAACTCCACTAACTTCGATACAACATCATCTGATGATGACAATGACCACCACAGCATGGAGAATGAGTCCATAGAGAAGAGGAGAAAGAGGAACAGTGGGAGGAGCTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAAGAAGCTTGTGGAGAAGCAGAAGGAGTGGTTGGATAAACTTGTGAAGACGCTGGAAGAGAAGGAGAAGGAGCGGGTGTTAAGAGAGGAAGAGTGGAGGAAACAAGAGGCTAACAGGTTAGAGAGGGAGCAAAAGTTTTGGGCCAAAGAGAGAGCGTGGATTGAAGCCAGGGATGCTGCTCTAATGGAGGCTTTACAAAAGCTAACTGGAAGAGAAATAATAAAGGCTGAAACTCCCAATGAGGGTATAAATGTAACGCCTGCTGAAGTTCAAAACCATAGTGAAAACCAGAATAATGAAGATGAGAGTGAAATCTTAAACAGGTGGCCAGAATCTGAAATTACAAGGCTTCAACAGCTGAGAGCTGAGATAGAGACAAGGTTTCCATGTAGTGAAATTTCTGAGGATGTTTCATGGGAGGTTGTAGCAACCAAAATGGCTTGTTTTGGCTACGAAAGGAGTGCTTTGATGTGCAAAGAGAAGTGGGAAAGTATGAGTAACTATCCAAGGGAGGGTGGTGAGAAGGAAGGGAGCAAGAAGTGCAAGGAAAACTCTAGAAACTGTTTTTTCTTCAAGAACAACGATGATCATCGACAATCTTCGTTATACGACCAAGGAAGTGGGTACTGTGATGATATGAGTGATCAAGGGAAAGAGATTGAGAGGCTACAAACAAATAATAGTTCTTCACCTTCAAAATCCAATGCTGGAAATGTTGATCCCTCTGATAGCTGCTTCCCCTTCTTGATGAGCACTGAGGGTGGAAACTTGTGGGAGAATTACGGCCTAAAGCTCAACAAAGAAAACCAAAATCACTGA 1809 0.4704 MEMEDHHHHHRHHHHHHHHHQQQQNHHHQQHQHQHHFAVNDLRQVVNAPRTSHNTFPSMPPHPTAELFPGHRNLAPLPTPQHHQQHYEVMMFGRDIMPPSLHDFTSTPHDPAAAAAAAAPTMALPTPPAFDAEGAACIAGDPSTGRWPRQETLTLLEIRSRLDPKFKEANHKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKDGKAGRHDGKHYRFFRQLEALYGENSSTVSVPETNVVGSIHFQASSHDPSQTNQDKFQSHNGKHCDSLSLTNSTNFDTTSSDDDNDHHSMENESIEKRRKRNSGRSWKVKIKDFIDSQMKKLVEKQKEWLDKLVKTLEEKEKERVLREEEWRKQEANRLEREQKFWAKERAWIEARDAALMEALQKLTGREIIKAETPNEGINVTPAEVQNHSENQNNEDESEILNRWPESEITRLQQLRAEIETRFPCSEISEDVSWEVVATKMACFGYERSALMCKEKWESMSNYPREGGEKEGSKKCKENSRNCFFFKNNDDHRQSSLYDQGSGYCDDMSDQGKEIERLQTNNSSSPSKSNAGNVDPSDSCFPFLMSTEGGNLWENYGLKLNKENQNH 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00875 602 CDD GT1 437 501 - -
Viun7g00875 602 MobiDBLite consensus disorder prediction 8 33 - -
Viun7g00875 602 ProSiteProfiles Myb-like domain profile. 139 204 IPR001005 -
Viun7g00875 602 MobiDBLite consensus disorder prediction 291 311 - -
Viun7g00875 602 Coils Coil 334 361 - -
Viun7g00875 602 MobiDBLite consensus disorder prediction 255 290 - -
Viun7g00875 602 Gene3D - 147 209 - -
Viun7g00875 602 Gene3D - 439 500 - -
Viun7g00875 602 ProSiteProfiles Myb-like domain profile. 437 496 IPR001005 -
Viun7g00875 602 MobiDBLite consensus disorder prediction 1 36 - -
Viun7g00875 602 Pfam Myb/SANT-like DNA-binding domain 437 523 IPR044822 -
Viun7g00875 602 Pfam Myb/SANT-like DNA-binding domain 146 232 IPR044822 -
Viun7g00875 602 FunFam Trihelix transcription factor GT-2 439 501 - -
Viun7g00875 602 CDD GT1 146 211 - -
Viun7g00875 602 SMART sant 435 498 IPR001005 -
Viun7g00875 602 SMART sant 143 206 IPR001005 -
Viun7g00875 602 MobiDBLite consensus disorder prediction 255 313 - -
Viun7g00875 602 FunFam trihelix transcription factor PTL-like 147 209 - -
Viun7g00875 602 PANTHER FI21293P1 67 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00875 Viun-Chr7 8032872 8036447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00875 32 598 Trihelix Transcription Factor Family AT5G03680 43.021 9.13e-129 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun7g00875 Myb_DNA-bind_4 3.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00875 - - aprc:113870891 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00875 7 8032872 8036447 Viun7g00875 7 8032872 8036447 ECH
Viun1g02489 1 35229979 35233613 Viun7g00875 7 8032872 8036447 PCT